Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19]
976 sequences; 31,529,786 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq511 181 2e-40
seq302 143 6e-29
seq381 109 1e-18
seq189 105 1e-17
seq73 102 2e-16
>seq511
Length=52245
Score = 181 bits (200), Expect = 2e-40
Identities = 179/229 (78%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || ||||| || | ||| || || ||||||||||| || |
Sbjct 18564 ACCACCCCGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGA 18623
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||||||||| || || || || || |||||||| | ||| |||||||| ||
Sbjct 18624 AAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGGGG 18683
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||||||||||||||| |||||| ||||| || ||| | ||||| ||||| || | || |
Sbjct 18684 AATACCCTCCTTGTCCTGGATC-TTGCTCTTCACGTTGTCGATTGTGTCGGAGGACTCCA 18742
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||| | ||||| ||||| || ||||||||||||||||| ||||||||
Sbjct 18743 CTTCCAATGTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 18791
Score = 176 bits (194), Expect = 9e-39
Identities = 178/229 (78%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||| || || || || || |||||||||||||| |
Sbjct 18792 ACCACCACGAAGACGGAGAACCAAGTGCAATGTAGACTCCTTCTGGATGTTGTAGTCGGA 18851
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||||||||| || ||||| || ||||| || || | ||||||||||||| ||
Sbjct 18852 AAGGGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAAATTAGACGTTGTTGGTCAGGGGG 18911
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||||||||||| ||||||||| ||||| || || |||| || ||||| || | ||| |
Sbjct 18912 GATACCCTCCTTATCTTGGATC-TTGCTCTTCACATTATCAATCGTGTCTGATGATTCAA 18970
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| || | |||||| ||||| || || | ||||||||| || ||||||||
Sbjct 18971 CCTCCAAAGTGATAGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 19019
Score = 145 bits (160), Expect = 2e-29
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| || || |||| || | || |||||| ||||| |||||||| |
Sbjct 19020 ACCACCACGCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATATTGTAGTCGGA 19079
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||||||||| || ||||| || || ||||| | ||| ||||||||| ||
Sbjct 19080 CAGGGTACGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGTTGGTCAGGAGG 19139
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| |||||||| || || ||||| | || ||| ||||||| ||||| | || ||
Sbjct 19140 GATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCGCTGGACTCAAC 19199
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089
|| || ||||| ||||| || ||||| ||||| ||||
Sbjct 19200 CTCAAGGGTGATAGTCTTGCCGGTCAAGGTCTTGACGA 19237
Score = 138 bits (152), Expect = 2e-27
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || ||||| || | ||| ||| || || ||||| ||||| |
Sbjct 19321 ACCACCACGCAGGCGCAGGACCAGGTGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGA 19380
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||||||||| | || || || || || |||| ||| ||||||||| ||
Sbjct 19381 AAGGGTGCGGCCATCCTCCAACTGCTTTCCAGCGAAAATCAGACGCTGTTGGTCAGGAGG 19440
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || |||||||| |||||||| | || || | |||||||| || | |||||
Sbjct 19441 GATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGCTGGACTCGAC 19500
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
|| |||||||| ||||| || ||
Sbjct 19501 CTCAAGAGTGATGGTCTTGCCGGT 19524
>seq302
Length=110528
Score = 143 bits (158), Expect = 6e-29
Identities = 139/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| || |||||||||||||| || || || || || ||||||
Sbjct 87377 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 87436
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| || ||||||||| || |||||||||||||| |||||||| | || ||| | |||
Sbjct 87437 AGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 87496
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| | ||||| ||||| || || ||||||||||||| ||||| |||||
Sbjct 87497 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 87555
>seq381
Length=63781
Score = 109 bits (120), Expect = 1e-18
Identities = 164/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 230178 GTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAAT 230237
|||| || ||| | |||||| | |||||| |||||||| ||| ||||||||||
Sbjct 4912 GTTGGAATTGAGCAAGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTGCTCGGCATGAAC 4971
Query 230238 GCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGG 230297
|| | || ||| | || || || || ||||| ||||| ||| | | || || || ||
Sbjct 4972 GCCAAGCTGATGTGCCAGTACATTGAGTTCGTCGCTGACCGTCTCCTGGTCGCTCTCGGT 5031
Query 230298 TACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAG 230357
|| |||| || ||||| |||||||||| || |||||| ||| || ||
Sbjct 5032 AACCAGAAGTACTACAACTCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCT 5091
Query 230358 GGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410
|| || || ||||||||||| ||||||||| | || || || | | |||||||
Sbjct 5092 GGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCCGGTGT 5144
>seq189
Length=66085
Score = 105 bits (116), Expect = 1e-17
Identities = 254/372 (68%), Gaps = 18/372 (5%)
Strand=Plus/Minus
Query 274433 GATGGGCGTGATAAATTTCTTCAGGAAACCTGGAATTTCTAGCAGACTGGGGAAACAACT 274492
||| || || || |||| ||||||| | || || | || |||||||| || ||
Sbjct 47903 GATAGGGGTAATGAATTCGATCAGGAACTCGGGGATCTTAAGTAGACTGGGAAA----CT 47848
Query 274493 ATG---GAAA-AAGTTCATGACAAGACCTGATATGTGAGTTCCGTCAACGTCGGCATCTG 274548
|| ||| ||||| |||| ||||| |||||| | ||||| || ||| |
Sbjct 47847 GTGCCTGAAGGAAGTTGATGAGTAGACCCTTGATGTGACTACCGTCGTGATCTTGATCGG 47788
Query 274549 TCATGATCATAACATGTCCATACCGAAGCGAGGAAGTATCTTTATACAACTTCCCTGT-T 274607
|||| ||||| | || ||||| || ||| || || ||||| |||| ||| |
Sbjct 47787 TCATAATCATGAGGTGGCCATATCGGAGCCCCTTGGTTTCCGTATACTCCTTCT-TGTGT 47729
Query 274608 TGAAGCCCAAGAATTTGCTTGAGAGCGGTGA-TTTCTTCGTTCTTTGTGATACTCGCCAC 274666
||||| |||| || | ||||| | ||| ||||| |||| || | ||| || | ||
Sbjct 47728 TGAAGACCAATAAAATTCTTGAT-GTTTTGAATTTCTGCGTTTTTGGAGAT-CTGGTCAA 47671
Query 274667 A-GAAGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCCATACCTTTCGC 274725
| || |||||||||||||| |||| ||| || || |||||||| || ||| || ||
Sbjct 47670 ATGATGCATCACGTACGTTGAGCAGCTTTCCACGAAGAGGGAATACACCAAACAGGTCTG 47611
Query 274726 GCCCGATGACCGAAAGACCGGCGATCGCGAG--AGTTGCTGCTGAATCTCCCTCTGTGAG 274783
| |||| || | | |||| || ||||| || ||| || ||||| || || |||||
Sbjct 47610 GACCGACAACAGCACGACCAGCCATCGCCAGGCCCTTG--GCGGAATCACCTTCAGTGAG 47553
Query 274784 AATCAAAGTACA 274795
||||| ||||||
Sbjct 47552 AATCAGAGTACA 47541
>seq73
Length=50798
Score = 102 bits (112), Expect = 2e-16
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || || || || | || || || |||||||||||||| |
Sbjct 32029 ACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 32088
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || || ||||| || || || || || ||||||| ||| ||||||||| ||
Sbjct 32089 GAGGGTACGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCAGGGGG 32148
Query 282992 AATACCCTCCTTGTCT 283007
|||||||||||||||
Sbjct 32149 GATACCCTCCTTGTCT 32164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046726110526304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |