Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19]
976 sequences; 31,529,786 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq511 132 1e-25
seq302 114 3e-20
seq418 93.3 1e-13
>seq511
Length=52245
Score = 132 bits (146), Expect = 1e-25
Identities = 149/198 (75%), Gaps = 1/198 (1%)
Strand=Plus/Minus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| || || | || || || || |||||||| ||||| || | ||||||||||
Sbjct 19237 TCGTCAAGACCTTGACCGGCAAGACTATCACCCTTGAGGTTGAGTCCAGCGACACCATCG 19178
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| |||||||| ||||||||||| || || || |||||||| ||||| || || || |
Sbjct 19177 ATAACGTCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAACAGCGTCTCA 19118
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
||||||| ||||||||||| || ||||| | || || |||| || || |||| ||||
Sbjct 19117 TCTTCGCTGGAAAACAGCTTGAGGATGGCCGTACCCTGTCCGACTACAATATCCAGAAAG 19058
Query 178111 AATCAACACTGCATCTTG 178128
|||| || || || ||||
Sbjct 19057 AATCTACCCTTCA-CTTG 19041
>seq302
Length=110528
Score = 114 bits (126), Expect = 3e-20
Identities = 136/183 (74%), Gaps = 6/183 (3%)
Strand=Plus/Minus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985
|||||| || || || || || || || || |||||||| || || ||| |||||
Sbjct 87556 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC---GACAC 87500
Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045
|||||| |||||||| ||||| |||||||| || || ||||| || ||||| || ||
Sbjct 87499 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAACAGCG 87440
Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105
|| |||||||| || || |||||||| ||||| | ||||| ||| || ||| ||||
Sbjct 87439 CCTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCA 87380
Query 178106 AAA 178108
||
Sbjct 87379 GAA 87377
>seq418
Length=141009
Score = 93.3 bits (102), Expect = 1e-13
Identities = 110/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 214252 CCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATCATCAAGA 214311
||||| || || || || || |||| ||| || || |||||||||||| ||||
Sbjct 95688 CCCTCCTTCTCATAACGCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCAAGG 95629
Query 214312 CCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCTTTTCATG 214371
||||| ||||||||||||||||| ||| |||| | |||||| | ||| | ||||||
Sbjct 95628 CCGGGGGCCTCGTTGGGGCAGAATAGAGTCCAGTCTCCATTGGACTCGACACGCTTCATG 95569
Query 214372 AAAAGGTCGGAAGTCCAGATTGCATAAAA 214400
|| || |||| ||||| | ||||| ||
Sbjct 95568 AACAGATCGGGGGTCCACAGGGCATAGAA 95540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203716147341344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |