Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3 105 7e-18 >seq3 Length=2521181 Score = 105 bits (116), Expect = 7e-18 Identities = 542/851 (64%), Gaps = 15/851 (2%) Strand=Plus/Minus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| || | || || || ||||| ||||| || ||||| | || || || |||| Sbjct 1109522 TGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCC 1109463 Query 16736 ATGAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAA 16794 ||||| || || || || | || | | || || | |||| || || | | | Sbjct 1109462 ATGAAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTGGTTACCG-AGAGCGACCAGGAG 1109404 Query 16795 TCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA-C 16853 | || || || || || || || |||||||| | | | |||||| || | ||| | Sbjct 1109403 ACGGTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGCGTTCATGCCGAGCAGAGC 1109344 Query 16854 GTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA- 16912 | | |||||||| || |||| || |||||| || |||| || || ||| || Sbjct 1109343 GCAA-GGAAGAGCGTCAGTCAGGAACTCTTGCTCAATTCCAACAGCCTCAACAATGATGT 1109285 Query 16913 -CTAG-CAACTCG-TTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCG 16969 || | |||| | || || || |||| |||| | | || |||| || || ||| Sbjct 1109284 CCTGGACAACCTGCTTGCTGGGGCGGT---TGTTCAGG-TGGGAGAACAGAAGGCAGGCG 1109229 Query 16970 AAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGC 17029 || || || | ||||| || | | ||| || |||||||| || |||| |||||| Sbjct 1109228 AAGTCAGTGTGCAGACCCTCATCACGGGAGATGAGCTCGTTAGAGAAGGTCAGACCGGGC 1109169 Query 17030 ATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCC 17089 || || || ||||| | ||| || || | |||||| || ||||| ||||| |||||| Sbjct 1109168 ATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCC 1109109 Query 17090 TCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCAT 17149 ||||||| || || || | | || || | || | || || | ||||| Sbjct 1109108 TCGACGGCAGCGAAGGCAACGAGACGGGAAGCAAAGGTAGAATCACGGTCTTGGATCCAG 1109049 Query 17150 TTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAAT 17209 |||| ||||| || |||| ||||| || ||||| ||||| | || | Sbjct 1109048 CGGATGGCCCAATCGGCCTTGCGCTTGATGCAGGGAATGGTTTCAATGGCATCGAAGAGG 1108989 Query 17210 TTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAG 17269 | || || | || | || || |||||||| || ||| ||| | |||||| Sbjct 1108988 TAGGTGCGTTGCTTGGGCTCCTTGATGTAGGTATCGATAAGAAGGGAGTAGGTCTCGGAG 1108929 Query 17270 TGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACT 17329 || || |||||||| ||||| || || || ||||| || || || | | || || Sbjct 1108928 TGGATATTCTCCATCATAATCTGGAAACCATAGAAGCAGCGAGCCTCAGTGACCTGGACC 1108869 Query 17330 TCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAAC 17389 || || ||| || || | || || || || || |||||||| |||||||| || Sbjct 1108868 TCAGCGCTGAAACGCTCAACAAGGTTCTCATTGACAATGCCGTCAGAGGCGGCGAAGAAA 1108809 Query 17390 GCCAATATATGCTTAATGAAATATTTTTCGTC--CGGT-GTAAGAACGCGCCAGTCCTTT 17446 || | | || | ||| || || || || | | | ||||||| | Sbjct 1108808 GCAAGAACGTGAGAGACGAAGTAACGCTCATCATCGTTCAGGCGGTTGTGCCAGTCGTGA 1108749 Query 17447 AAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATAC 17506 | ||| ||||| | ||| | || |||| |||||| ||| |||| | ||||| || ||| Sbjct 1108748 AGATCCTTGGACAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTAC 1108689 Query 17507 ATATTCCAAAT 17517 || | ||| || Sbjct 1108688 ATTTGCCAGAT 1108678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545276534000