Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09]
50 sequences; 33,998,198 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq8 118 1e-21
>seq8
Length=1820348
Score = 118 bits (130), Expect = 1e-21
Identities = 413/642 (64%), Gaps = 2/642 (0%)
Strand=Plus/Minus
Query 54029 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATG 54087
|| || ||||| || ||||| || |||| || || ||| || || || | || |
Sbjct 1045971 ACACGCTTCATGAACAGATCGGGGGTCCACAGGGC-ATAGAACAGGTCACGGGCACGGAT 1045913
Query 54088 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 54147
|||||| || || ||||| || ||||||||| | | | ||| | ||||| ||
Sbjct 1045912 TTCCTCCTTACCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGACATCCGCGTGCCATGG 1045853
Query 54148 TTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 54207
|| | ||| |||| | | || || || |||||||| ||||| || | || | ||
Sbjct 1045852 CTCAAGGTAGATGGCAAAGGCACCGGGACGCTTGTTTCCACCCTGGTCGACATAGCGGGC 1045793
Query 54208 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGA 54267
||||| || || || | | ||| || | |||||| || || | ||| || || |||
Sbjct 1045792 TGTGTTGTTGTACACGCGGAGCATGGGGACAATACCGTTCGAGGTACCGTTAGTTCCGCC 1045733
Query 54268 GATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTT 54327
|| || ||| | || ||||| || ||||| || || || || | ||
Sbjct 1045732 AATGTAAGAGCCAGTCGCGCGAATGCGGTGGATGTTCAGACCAATACCACCAGCAGTCTT 1045673
Query 54328 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 54387
||||| | || || || || ||||| ||||| ||||| || || || ||| ||||
Sbjct 1045672 TGAGATCATGGCACAGGTCTTCAAAGTATCGTAGATACCCTCAATGCTGTCCTCCTTCAT 1045613
Query 54388 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 54447
| || || || || | || |||| | | || || || || || | ||| ||
Sbjct 1045612 ATCAACCAGGAAGCAAGAGGCCAGTTGGGGCTGGGGGGTACCAGCGTTGAACAGGGTTGG 1045553
Query 54448 AGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTAT 54507
||||||||| || || | |||| ||| | | | ||| ||||| || || || ||
Sbjct 1045552 AGAAGCGTGAGTGAAGTACTTTTGAGACATCAAGTGGTAGGTCTCAATGGCCTTCTCAAT 1045493
Query 54508 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 54567
|||| | ||||| || || || |||||||| | || ||||||||| | ||| |||
Sbjct 1045492 ATCCTCTCCGTGAATACCAACAGCAACACGCATCAGCAGGTGCTGAGGACGCTCAGCGAC 1045433
Query 54568 CTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 54627
||| | || |||| || || |||| || || || || || |||||||
Sbjct 1045432 TTTGCCATCAATACGGAGCAGATATGAACGCTCCAGGGTCTTGAAGCCGAAGAAGTTGTA 1045373
Query 54628 TGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATC 54669
||||| || ||||| | ||| | ||||| || | |||
Sbjct 1045372 GTTGAAGTCACGGTCGTAGACAATGGCGGAGTTAAGCTCATC 1045331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721228924000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |