Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq3 306 4e-78 seq8 123 3e-23 seq7 104 2e-17 seq2 95.1 1e-14 >seq3 Length=2521181 Score = 306 bits (338), Expect = 4e-78 Identities = 560/810 (69%), Gaps = 19/810 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| ||||||| | || ||| Sbjct 1108678 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGATCTG 1108737 Query 116696 TCCAAGGACACGAGCGACTGG---GAGCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| ||||||| | ||| ||||||| | ||||| | ||| || Sbjct 1108738 TCCAAGGATCTTCACGACTGGCACAACCGCCTGAACGATGATGAGCGTTACTTCGTCTCT 1108797 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || ||||||||| |||||||| ||||| ||||| || || |||||| Sbjct 1108798 CACGTTCTTGCTTTCTTCGCCGCCTCTGACGGCATTGTCAATGAGAACCTTGTTGAGCGT 1108857 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | ||||| ||||| | ||||| || |||||||| || || ||||| || Sbjct 1108858 TTCAGCGC-TGAGGTCCAGGTCACTGAGGCTCGCTGCTTCTATGGTTTCCAGATTATGAT 1108916 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTT 116927 |||||| | ||||| || | || || || ||||| || ||| | | || | Sbjct 1108917 GGAGAATATCCACTCCGAGACCTACTCCCTTCTTATCGATACCTACATCAAGGAGCCC-- 1108974 Query 116928 CGGAGGAGAAGCTCC-GTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAG 116986 | | | || || | || | ||||| || || || || ||| |||| ||| Sbjct 1108975 ---AAGCAACGCACCTACCTCTTCGATGCCATTGAAACCATTCCCTGCATCAAGCGCAAG 1109031 Query 116987 GCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTG 117046 ||||| ||||| | ||||||||| | | | || | |||| | || || || Sbjct 1109032 GCCGATTGGGCCATCCGCTGGATCCAAGACCGTGATTCTACCTTTGCTTCCCGTCTCGTT 1109091 Query 117047 GCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTC 117106 |||||||| ||||||||||| ||||||| || ||| ||||||| | || || |||||| Sbjct 1109092 GCCTTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCTATCTTCTGGCTC 1109151 Query 117107 AAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAG 117166 ||||| || || ||||||||||| ||||| ||| ||||||||||||||| | || ||| Sbjct 1109152 AAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCTAACGAGCTCATCTCCCGTGATGAG 1109211 Query 117167 GGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCG 117226 |||||||| ||||| ||||| | |||||| || || | || || ||| | Sbjct 1109212 GGTCTGCACACTGACTTCGCCTGCCTTCTGTTCTCCCACCTGAACAACCGCCCCAGCAAG 1109271 Query 117227 GCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 | ||| ||| ||| | || || || | || ||||| ||||| || || Sbjct 1109272 CAGGTTGTCCAGGACATCATTGTTGAGGCTGTTGGAATTGAGCAAGAGTTCCTGACTGAC 1109331 Query 117287 GCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGT 117344 || || || |||| |||||| || | || || || | ||||| || ||||| |||| Sbjct 1109332 GCTCTTCC-TTGCGCTCTGCTCGGCATGAA-CGCCAAGCTGATGTGCCAGTACATTGAGT 1109389 Query 117345 TCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACC 117404 ||||||| ||| | || ||| ||| || | | ||| |||||||| | |||||| Sbjct 1109390 TCGTCGCTGACCGTCTCCTGGTCGCTCTCGGTAACCAGAAGTACTACAACTCTGCCAACC 1109449 Query 117405 CGCTGGACTTTATGAACCTCATCTCCTTGG 117434 | | ||||| ||| | ||||||| ||| Sbjct 1109450 CCTTCGACTTCATGGAGTCCATCTCCCTGG 1109479 >seq8 Length=1820348 Score = 123 bits (136), Expect = 3e-23 Identities = 138/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || ||||| ||| |||||||||| | | ||||| | | Sbjct 642586 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 642645 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| ||||| |||||| | ||||| || || || Sbjct 642646 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAACAGCGCCT 642704 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| ||||| ||||| || || | ||||| || | |||||||||||||||||| Sbjct 642705 GATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAGAA 642764 Query 40878 GG 40879 || Sbjct 642765 GG 642766 >seq7 Length=2000612 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| |||||||| | || || || || || Sbjct 1447482 ATGCAGATCTTCGTTAAGACTTTGACCGGCAAGACCATCACATTGGAAGTGGAGTCCTCC 1447423 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || || | ||||| ||||| || ||| | ||||| Sbjct 1447422 GACACAATCGACAACG-TGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCA 1447364 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| || || || |||||||| || | |||||||| || ||||| Sbjct 1447363 ACAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACCCTTTCGGATTACAA 1447304 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||| |||| || || || ||| Sbjct 1447303 CATCCAGAAGGAGTCCACTCTTCACCTGGTG 1447273 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| ||||| || ||||| | || || ||| | | Sbjct 1447710 ATGCAGATCTTTGTTAAGACTCTCACCGGCAAGACTATCACTTTGGAGGTTGAATCATCA 1447651 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || || | | ||| || || | || || ||||| |||||| | ||||| Sbjct 1447650 GACACGATTGATAATG-TGAAGAGCAAGATCCAAGATAAGGAGGGTATCCCCCCTGACCA 1447592 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| || || | ||| ||||| || || || || | |||||||| ||||||||| Sbjct 1447591 ACAACGTCTAATTTTCGCCGGCAAGCAACTTGAAGATGGCCGCACCCTTTCCGACTACAA 1447532 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || |||| Sbjct 1447531 CATCCAGAAGGAGTCTACATTGCA 1447508 Score = 100 bits (110), Expect = 3e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 |||| || || | || ||||| || |||||| | || || || ||| ||||| | | Sbjct 1447928 TCGTCAAGACCTTGACCGGCAAGACTATCACCCTTGAGGTTGAGTCCAGCGACACCATCG 1447869 Query 40760 A-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | |||| ||||| || |||| || || ||||||||||| | ||||| || || ||| Sbjct 1447868 ATAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAACAGCGTCTC 1447810 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| || |||||||| || || | || ||||| ||||||||| |||||||| Sbjct 1447809 ATCTTCGCTGGAAAACAGCTTGAGGATGGCCGTACCCTGTCCGACTACAATATCCAGAAA 1447750 Query 40879 GA 40880 || Sbjct 1447749 GA 1447748 >seq2 Length=3417088 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| | ||||| || || || |||| ||| || || ||||| || Sbjct 664754 GACAAGGAGGGTATCCCCCCTGACCAACAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAG 664695 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| || |||||| ||||||||||||||||||||| | || || || || || | Sbjct 664694 GACGGTCGTACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTC 664635 Query 40903 CGCTTGAGGGGCGGCGG 40919 ||| || | || || || Sbjct 664634 CGCCTGCGTGGTGGTGG 664618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218877988000