Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09]
50 sequences; 33,998,198 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq3 306 4e-78
seq8 123 3e-23
seq7 104 2e-17
seq2 95.1 1e-14
>seq3
Length=2521181
Score = 306 bits (338), Expect = 4e-78
Identities = 560/810 (69%), Gaps = 19/810 (2%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||| || |||||||||| ||||||| | || |||
Sbjct 1108678 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGATCTG 1108737
Query 116696 TCCAAGGACACGAGCGACTGG---GAGCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|||||||| ||||||| | ||| ||||||| | ||||| | ||| ||
Sbjct 1108738 TCCAAGGATCTTCACGACTGGCACAACCGCCTGAACGATGATGAGCGTTACTTCGTCTCT 1108797
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||||| || || || ||||||||| |||||||| ||||| ||||| || || ||||||
Sbjct 1108798 CACGTTCTTGCTTTCTTCGCCGCCTCTGACGGCATTGTCAATGAGAACCTTGTTGAGCGT 1108857
Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
||| || | ||||| ||||| | ||||| || |||||||| || || ||||| ||
Sbjct 1108858 TTCAGCGC-TGAGGTCCAGGTCACTGAGGCTCGCTGCTTCTATGGTTTCCAGATTATGAT 1108916
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTT 116927
|||||| | ||||| || | || || || ||||| || ||| | | || |
Sbjct 1108917 GGAGAATATCCACTCCGAGACCTACTCCCTTCTTATCGATACCTACATCAAGGAGCCC-- 1108974
Query 116928 CGGAGGAGAAGCTCC-GTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAG 116986
| | | || || | || | ||||| || || || || ||| |||| |||
Sbjct 1108975 ---AAGCAACGCACCTACCTCTTCGATGCCATTGAAACCATTCCCTGCATCAAGCGCAAG 1109031
Query 116987 GCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTG 117046
||||| ||||| | ||||||||| | | | || | |||| | || || ||
Sbjct 1109032 GCCGATTGGGCCATCCGCTGGATCCAAGACCGTGATTCTACCTTTGCTTCCCGTCTCGTT 1109091
Query 117047 GCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTC 117106
|||||||| ||||||||||| ||||||| || ||| ||||||| | || || ||||||
Sbjct 1109092 GCCTTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCTATCTTCTGGCTC 1109151
Query 117107 AAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAG 117166
||||| || || ||||||||||| ||||| ||| ||||||||||||||| | || |||
Sbjct 1109152 AAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCTAACGAGCTCATCTCCCGTGATGAG 1109211
Query 117167 GGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCG 117226
|||||||| ||||| ||||| | |||||| || || | || || ||| |
Sbjct 1109212 GGTCTGCACACTGACTTCGCCTGCCTTCTGTTCTCCCACCTGAACAACCGCCCCAGCAAG 1109271
Query 117227 GCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286
| ||| ||| ||| | || || || | || ||||| ||||| || ||
Sbjct 1109272 CAGGTTGTCCAGGACATCATTGTTGAGGCTGTTGGAATTGAGCAAGAGTTCCTGACTGAC 1109331
Query 117287 GCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGT 117344
|| || || |||| |||||| || | || || || | ||||| || ||||| ||||
Sbjct 1109332 GCTCTTCC-TTGCGCTCTGCTCGGCATGAA-CGCCAAGCTGATGTGCCAGTACATTGAGT 1109389
Query 117345 TCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACC 117404
||||||| ||| | || ||| ||| || | | ||| |||||||| | ||||||
Sbjct 1109390 TCGTCGCTGACCGTCTCCTGGTCGCTCTCGGTAACCAGAAGTACTACAACTCTGCCAACC 1109449
Query 117405 CGCTGGACTTTATGAACCTCATCTCCTTGG 117434
| | ||||| ||| | ||||||| |||
Sbjct 1109450 CCTTCGACTTCATGGAGTCCATCTCCCTGG 1109479
>seq8
Length=1820348
Score = 123 bits (136), Expect = 3e-23
Identities = 138/182 (76%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || ||||| || ||||| ||| |||||||||| | | ||||| | |
Sbjct 642586 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 642645
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | ||||| ||||| |||||| | ||||| || || ||
Sbjct 642646 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAACAGCGCCT 642704
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| ||||| ||||| || || | ||||| || | ||||||||||||||||||
Sbjct 642705 GATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAGAA 642764
Query 40878 GG 40879
||
Sbjct 642765 GG 642766
>seq7
Length=2000612
Score = 104 bits (114), Expect = 2e-17
Identities = 151/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || ||||| |||||||| | || || || || ||
Sbjct 1447482 ATGCAGATCTTCGTTAAGACTTTGACCGGCAAGACCATCACATTGGAAGTGGAGTCCTCC 1447423
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | ||| || || | ||||| ||||| || ||| | |||||
Sbjct 1447422 GACACAATCGACAACG-TGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCA 1447364
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || || |||| || || || |||||||| || | |||||||| || |||||
Sbjct 1447363 ACAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACCCTTTCGGATTACAA 1447304
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
||||||||||||| |||| || || || |||
Sbjct 1447303 CATCCAGAAGGAGTCCACTCTTCACCTGGTG 1447273
Score = 100 bits (110), Expect = 3e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || ||||| ||||| || ||||| | || || ||| | |
Sbjct 1447710 ATGCAGATCTTTGTTAAGACTCTCACCGGCAAGACTATCACTTTGGAGGTTGAATCATCA 1447651
Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | || || | | ||| || || | || || ||||| |||||| | |||||
Sbjct 1447650 GACACGATTGATAATG-TGAAGAGCAAGATCCAAGATAAGGAGGGTATCCCCCCTGACCA 1447592
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||||| || || | ||| ||||| || || || || | |||||||| |||||||||
Sbjct 1447591 ACAACGTCTAATTTTCGCCGGCAAGCAACTTGAAGATGGCCGCACCCTTTCCGACTACAA 1447532
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | || ||||
Sbjct 1447531 CATCCAGAAGGAGTCTACATTGCA 1447508
Score = 100 bits (110), Expect = 3e-16
Identities = 133/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759
|||| || || | || ||||| || |||||| | || || || ||| ||||| | |
Sbjct 1447928 TCGTCAAGACCTTGACCGGCAAGACTATCACCCTTGAGGTTGAGTCCAGCGACACCATCG 1447869
Query 40760 A-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| |||| ||||| || |||| || || ||||||||||| | ||||| || || |||
Sbjct 1447868 ATAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAACAGCGTCTC 1447810
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| ||| || |||||||| || || | || ||||| ||||||||| ||||||||
Sbjct 1447809 ATCTTCGCTGGAAAACAGCTTGAGGATGGCCGTACCCTGTCCGACTACAATATCCAGAAA 1447750
Query 40879 GA 40880
||
Sbjct 1447749 GA 1447748
>seq2
Length=3417088
Score = 95.1 bits (104), Expect = 1e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| ||||| |||||| | ||||| || || || |||| ||| || || ||||| ||
Sbjct 664754 GACAAGGAGGGTATCCCCCCTGACCAACAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAG 664695
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|||| || |||||| ||||||||||||||||||||| | || || || || || |
Sbjct 664694 GACGGTCGTACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTC 664635
Query 40903 CGCTTGAGGGGCGGCGG 40919
||| || | || || ||
Sbjct 664634 CGCCTGCGTGGTGGTGG 664618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218877988000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |