Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09]
50 sequences; 33,998,198 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq8 118 1e-21
seq3 116 5e-21
>seq8
Length=1820348
Score = 118 bits (130), Expect = 1e-21
Identities = 413/642 (64%), Gaps = 2/642 (0%)
Strand=Plus/Minus
Query 63267 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTTGTTCTATG 63325
|| || ||||| || ||||| || |||| || || ||| || || || | | |
Sbjct 1045971 ACACGCTTCATGAACAGATCGGGGGTCCACAGGGC-ATAGAACAGGTCACGGGCACGGAT 1045913
Query 63326 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63385
|||||| || || ||||| || ||||||||| | | | ||| | ||||| ||
Sbjct 1045912 TTCCTCCTTACCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGACATCCGCGTGCCATGG 1045853
Query 63386 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 63445
|| | ||| ||||| | | || || || |||||||| ||||| || | || | ||
Sbjct 1045852 CTCAAGGTAGATGGCAAAGGCACCGGGACGCTTGTTTCCACCCTGGTCGACATAGCGGGC 1045793
Query 63446 GGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGA 63505
||||| || || || | | ||| || | ||||||||| || |||| || || |||
Sbjct 1045792 TGTGTTGTTGTACACGCGGAGCATGGGGACAATACCGTTCGAGGTACCGTTAGTTCCGCC 1045733
Query 63506 GATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTT 63565
|| || ||| | || ||||| || ||||| || || || || | ||
Sbjct 1045732 AATGTAAGAGCCAGTCGCGCGAATGCGGTGGATGTTCAGACCAATACCACCAGCAGTCTT 1045673
Query 63566 AGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCAT 63625
||||| | || || || || || || ||||| || || ||||| || || ||||
Sbjct 1045672 TGAGATCATGGCACAGGTCTTCAAAGTATCGTAGATACCCTCAATGCTGTCCTCCTTCAT 1045613
Query 63626 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGG 63685
| || || || || | || |||| | | | || || || || || | ||| ||
Sbjct 1045612 ATCAACCAGGAAGCAAGAGGCCAGTTGGGGCTGGGGGGTACCAGCGTTGAACAGGGTTGG 1045553
Query 63686 AGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT 63745
||||||||| || || | |||| ||| | | | ||| |||||||| || || ||
Sbjct 1045552 AGAAGCGTGAGTGAAGTACTTTTGAGACATCAAGTGGTAGGTCTCAATGGCCTTCTCAAT 1045493
Query 63746 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAAT 63805
|||| | ||||| || || || |||||||| | || ||||||||| | ||| | |
Sbjct 1045492 ATCCTCTCCGTGAATACCAACAGCAACACGCATCAGCAGGTGCTGAGGACGCTCAGCGAC 1045433
Query 63806 TTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63865
|||| | || | || || || |||| || || || || || |||||||
Sbjct 1045432 TTTGCCATCAATACGGAGCAGATATGAACGCTCCAGGGTCTTGAAGCCGAAGAAGTTGTA 1045373
Query 63866 TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATC 63907
||||| || ||||| | ||| | || || |||| |||
Sbjct 1045372 GTTGAAGTCACGGTCGTAGACAATGGCGGAGTTAAGCTCATC 1045331
>seq3
Length=2521181
Score = 116 bits (128), Expect = 5e-21
Identities = 285/429 (66%), Gaps = 5/429 (1%)
Strand=Plus/Minus
Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641
|| ||||| || |||||||||||| || | || | |||||||| || || ||
Sbjct 1109234 CAGGCGAAGTCAGTGTGCAGACCCTCATCACGGGAGATGAGCTCGTTAGAGAAGGTCAGA 1109175
Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701
|||||||| || |||||||| || ||||| || || || ||||| || || || ||||||
Sbjct 1109174 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAG 1109115
Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33758
|| || || || ||||| ||||||| || | || | | | | ||| ||
Sbjct 1109114 ATACCCTCGACGGCAGCGAAGGCAACGAGACGGGAAGCAAAGGTAGAATCACGGTCTTGG 1109055
Query 33759 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817
||||| | || |||||||||||||| || | || || || ||||| |||||||
Sbjct 1109054 ATCCAGCGGATG-GCCCAATCGGCCTTGCGCTTGATGCAGGGAATGGTTTCAATGGCATC 1108996
Query 33818 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33877
||||| ||| | || || || || | || |||||||| | ||| || |
Sbjct 1108995 GAAGAGGTAGGTGCGTTGCTTGGGCTCCTTGATGTAGGTATCGATAAGAAGGGAGTAGGT 1108936
Query 33878 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33937
|| || || || || || || ||||| || || ||||| || | |||||| || |
Sbjct 1108935 CTCGGAGTGGATATTCTCCATCATAATCTGGAAACCATAGAAGCAGCGAGCCTCAGTGAC 1108876
Query 33938 CTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGC 33997
||| || || | | || || || | | || ||||| || || || ||| ||| ||
Sbjct 1108875 CTGGACCTCAGCGCTGAAACGCTCAACAAGGTTCTCATTGACAATGCCGTCAGAGGCGGC 1108816
Query 33998 AAAAAACGC 34006
|| || ||
Sbjct 1108815 GAAGAAAGC 1108807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817206364000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |