Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq8 118 1e-21 seq3 116 5e-21 >seq8 Length=1820348 Score = 118 bits (130), Expect = 1e-21 Identities = 413/642 (64%), Gaps = 2/642 (0%) Strand=Plus/Minus Query 63267 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTTGTTCTATG 63325 || || ||||| || ||||| || |||| || || ||| || || || | | | Sbjct 1045971 ACACGCTTCATGAACAGATCGGGGGTCCACAGGGC-ATAGAACAGGTCACGGGCACGGAT 1045913 Query 63326 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63385 |||||| || || ||||| || ||||||||| | | | ||| | ||||| || Sbjct 1045912 TTCCTCCTTACCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGACATCCGCGTGCCATGG 1045853 Query 63386 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 63445 || | ||| ||||| | | || || || |||||||| ||||| || | || | || Sbjct 1045852 CTCAAGGTAGATGGCAAAGGCACCGGGACGCTTGTTTCCACCCTGGTCGACATAGCGGGC 1045793 Query 63446 GGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGA 63505 ||||| || || || | | ||| || | ||||||||| || |||| || || ||| Sbjct 1045792 TGTGTTGTTGTACACGCGGAGCATGGGGACAATACCGTTCGAGGTACCGTTAGTTCCGCC 1045733 Query 63506 GATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTT 63565 || || ||| | || ||||| || ||||| || || || || | || Sbjct 1045732 AATGTAAGAGCCAGTCGCGCGAATGCGGTGGATGTTCAGACCAATACCACCAGCAGTCTT 1045673 Query 63566 AGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCAT 63625 ||||| | || || || || || || ||||| || || ||||| || || |||| Sbjct 1045672 TGAGATCATGGCACAGGTCTTCAAAGTATCGTAGATACCCTCAATGCTGTCCTCCTTCAT 1045613 Query 63626 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGG 63685 | || || || || | || |||| | | | || || || || || | ||| || Sbjct 1045612 ATCAACCAGGAAGCAAGAGGCCAGTTGGGGCTGGGGGGTACCAGCGTTGAACAGGGTTGG 1045553 Query 63686 AGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT 63745 ||||||||| || || | |||| ||| | | | ||| |||||||| || || || Sbjct 1045552 AGAAGCGTGAGTGAAGTACTTTTGAGACATCAAGTGGTAGGTCTCAATGGCCTTCTCAAT 1045493 Query 63746 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAAT 63805 |||| | ||||| || || || |||||||| | || ||||||||| | ||| | | Sbjct 1045492 ATCCTCTCCGTGAATACCAACAGCAACACGCATCAGCAGGTGCTGAGGACGCTCAGCGAC 1045433 Query 63806 TTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63865 |||| | || | || || || |||| || || || || || ||||||| Sbjct 1045432 TTTGCCATCAATACGGAGCAGATATGAACGCTCCAGGGTCTTGAAGCCGAAGAAGTTGTA 1045373 Query 63866 TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATC 63907 ||||| || ||||| | ||| | || || |||| ||| Sbjct 1045372 GTTGAAGTCACGGTCGTAGACAATGGCGGAGTTAAGCTCATC 1045331 >seq3 Length=2521181 Score = 116 bits (128), Expect = 5e-21 Identities = 285/429 (66%), Gaps = 5/429 (1%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || ||||| || |||||||||||| || | || | |||||||| || || || Sbjct 1109234 CAGGCGAAGTCAGTGTGCAGACCCTCATCACGGGAGATGAGCTCGTTAGAGAAGGTCAGA 1109175 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| || |||||||| || ||||| || || || ||||| || || || |||||| Sbjct 1109174 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAG 1109115 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33758 || || || || ||||| ||||||| || | || | | | | ||| || Sbjct 1109114 ATACCCTCGACGGCAGCGAAGGCAACGAGACGGGAAGCAAAGGTAGAATCACGGTCTTGG 1109055 Query 33759 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817 ||||| | || |||||||||||||| || | || || || ||||| ||||||| Sbjct 1109054 ATCCAGCGGATG-GCCCAATCGGCCTTGCGCTTGATGCAGGGAATGGTTTCAATGGCATC 1108996 Query 33818 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33877 ||||| ||| | || || || || | || |||||||| | ||| || | Sbjct 1108995 GAAGAGGTAGGTGCGTTGCTTGGGCTCCTTGATGTAGGTATCGATAAGAAGGGAGTAGGT 1108936 Query 33878 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33937 || || || || || || || ||||| || || ||||| || | |||||| || | Sbjct 1108935 CTCGGAGTGGATATTCTCCATCATAATCTGGAAACCATAGAAGCAGCGAGCCTCAGTGAC 1108876 Query 33938 CTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGC 33997 ||| || || | | || || || | | || ||||| || || || ||| ||| || Sbjct 1108875 CTGGACCTCAGCGCTGAAACGCTCAACAAGGTTCTCATTGACAATGCCGTCAGAGGCGGC 1108816 Query 33998 AAAAAACGC 34006 || || || Sbjct 1108815 GAAGAAAGC 1108807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817206364000