Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09]
50 sequences; 33,998,198 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq7 105 7e-18
seq3 82.4 8e-11
>seq7
Length=2000612
Score = 105 bits (116), Expect = 7e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
|| || || || | ||| | || | ||||| || ||||| || || ||||| |||||
Sbjct 1447253 TGACCACCCCGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCC 1447312
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
| |||| ||||| ||||| ||||||||| |||| ||||| || || |||||
Sbjct 1447313 GAAAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGG 1447372
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714
|| || || || ||||| ||| || || | | || | |||||||| || ||||
Sbjct 1447373 GGAATACCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATTGTGTCGGAGGACTCC 1447432
Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| || | || | |||||||||||||| || || ||||| || ||||||
Sbjct 1447433 ACTTCCAATGTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCATA 1447483
Score = 98.7 bits (108), Expect = 1e-15
Identities = 154/218 (71%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||||| || ||||||| ||||| ||||| || || || || ||| |
Sbjct 1447712 CCACCACGCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATATTGTAGTCGGAC 1447771
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | || || |||||||| ||||| |||| ||||| || || || |||||
Sbjct 1447772 AGGGTACGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGTTGGTCAGGAGGG 1447831
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCAC 139716
||||| || || || ||| | || | || | | || | |||||| ||| ||| ||
Sbjct 1447832 ATGCCCTCCTTATCC-TGAATCTTGGACTTGACGTTATCGATGGTGTCGCTGGACTCAAC 1447890
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGA 139754
||||| ||| | |||||||||||||| || || ||||
Sbjct 1447891 CTCAAGGGTGATAGTCTTGCCGGTCAAGGTCTTGACGA 1447928
>seq3
Length=2521181
Score = 82.4 bits (90), Expect = 8e-11
Identities = 153/225 (68%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896
||||| || | ||||| ||||||| | || |||||| | || | || | |||
Sbjct 1109296 GAGGCTGTTGGAATTGAGCAAGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTGCTCGGC 1109355
Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956
|||||||| | |||||||| ||||||| ||||| || || ||| | || || |
Sbjct 1109356 ATGAACGCCAAGCTGATGTGCCAGTACATTGAGTTCGTCGCTGACCGTCTCCTGGTCGCT 1109415
Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016
|||||| | | ||| ||||| || | |||||||| || ||| | ||| ||
Sbjct 1109416 CTCGGTAACCAGAAGTACTACAACTCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCC 1109475
Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061
|| | ||||| || ||||| ||||||| ||||| || || |||
Sbjct 1109476 CTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 1109520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063689960000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |