Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq8 138 2e-27 seq3 129 8e-25 >seq8 Length=1820348 Score = 138 bits (152), Expect = 2e-27 Identities = 464/720 (64%), Gaps = 2/720 (0%) Strand=Plus/Minus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 ||||||||||| || | ||||| | | || || |||| || || | | | | Sbjct 1046049 TCGAACTCGTCGCCGTAGACATCAGCAAGGCCGGGGGCCTCGTTGGGGCAGAATAGAGTC 1045990 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 79979 || ||||||| || || || ||||| || ||||| || |||| || || ||| || Sbjct 1045989 CAGTCTCCATTGGACTCGACACGCTTCATGAACAGATCGGGGGTCCACAGGGC-ATAGAA 1045931 Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039 || || | || | ||||| || || ||||| || ||||||||| | | Sbjct 1045930 CAGGTCACGGGCACGGATTTCCTCCTTACCGTGGTTCTTGCGGAGGTCGAGGAACTCGAA 1045871 Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099 | ||| | ||||| || || | ||| ||||| | | || || || |||||||| || Sbjct 1045870 GACATCCGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACCGGGACGCTTGTTTCCACC 1045811 Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159 ||| || | || | || ||||| || || || | | ||| || | |||||| || || Sbjct 1045810 CTGGTCGACATAGCGGGCTGTGTTGTTGTACACGCGGAGCATGGGGACAATACCGTTCGA 1045751 Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 80219 ||||| || || ||| || || ||| | || ||||| || ||||| Sbjct 1045750 GGTACCGTTAGTTCCGCCAATGTAAGAGCCAGTCGCGCGAATGCGGTGGATGTTCAGACC 1045691 Query 80220 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 80279 || || || || | || ||||| | || || || || ||||| ||||| ||||| Sbjct 1045690 AATACCACCAGCAGTCTTTGAGATCATGGCACAGGTCTTCAAAGTATCGTAGATACCCTC 1045631 Query 80280 TATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 80339 ||||| || || |||| | || || || || | || |||| | | || || Sbjct 1045630 AATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAGGCCAGTTGGGGCTGGGGGGTACC 1045571 Query 80340 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGT 80399 || || || | ||| ||||||||||| || || | |||| ||||| | | ||| || Sbjct 1045570 AGCGTTGAACAGGGTTGGAGAAGCGTGAGTGAAGTACTTTTGAGACATCAAGTGGTAGGT 1045511 Query 80400 CTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTG 80459 |||||| || || |||||| | ||||| || || || |||||||| | || ||| Sbjct 1045510 CTCAATGGCCTTCTCAATATCCTCTCCGTGAATACCAACAGCAACACGCATCAGCAGGTG 1045451 Query 80460 CTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTT 80519 |||||| | ||| ||| ||| || || | || || || |||| || || Sbjct 1045450 CTGAGGACGCTCAGCGACTTTGCCATCAATACGGAGCAGATATGAACGCTCCAGGGTCTT 1045391 Query 80520 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATC 80579 || || || ||||||| ||||| || ||||| | ||| | ||||| || | ||| Sbjct 1045390 GAAGCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTAGACAATGGCGGAGTTAAGCTCATC 1045331 >seq3 Length=2521181 Score = 129 bits (142), Expect = 8e-25 Identities = 288/429 (67%), Gaps = 5/429 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| || |||||||||||| || | || || ||||| || || || || Sbjct 1109234 CAGGCGAAGTCAGTGTGCAGACCCTCATCACGGGAGATGAGCTCGTTAGAGAAGGTCAGA 1109175 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| || |||||||| || ||||| || || || || || || ||||| |||||| Sbjct 1109174 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAG 1109115 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGT 50136 || || || || || || |||||||| || | || | | | | | ||| || Sbjct 1109114 ATACCCTCGACGGCAGCGAAGGCAACGAGACGGGAAGCAAAGGTAGAATCACGGTCTTGG 1109055 Query 50137 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 ||||| | || |||||||||||||| || | || || || ||||| ||||||| Sbjct 1109054 ATCCAGCGGATG-GCCCAATCGGCCTTGCGCTTGATGCAGGGAATGGTTTCAATGGCATC 1108996 Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255 ||||| ||| | || || || || | || |||||||| | ||| || | Sbjct 1108995 GAAGAGGTAGGTGCGTTGCTTGGGCTCCTTGATGTAGGTATCGATAAGAAGGGAGTAGGT 1108936 Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315 || || || || || || || ||||| || || ||||| || | |||||| || | Sbjct 1108935 CTCGGAGTGGATATTCTCCATCATAATCTGGAAACCATAGAAGCAGCGAGCCTCAGTGAC 1108876 Query 50316 CTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 50375 ||| || || | | || || ||| | | || ||||| || || |||||| ||| || Sbjct 1108875 CTGGACCTCAGCGCTGAAACGCTCAACAAGGTTCTCATTGACAATGCCGTCAGAGGCGGC 1108816 Query 50376 AAAAAACGC 50384 || || || Sbjct 1108815 GAAGAAAGC 1108807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268351082000