Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09]
50 sequences; 33,998,198 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq3 125 1e-23
seq8 122 1e-22
>seq3
Length=2521181
Score = 125 bits (138), Expect = 1e-23
Identities = 287/429 (67%), Gaps = 5/429 (1%)
Strand=Plus/Minus
Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124
|| ||||| || ||||||||||||||| | || | ||||| || || || ||
Sbjct 1109234 CAGGCGAAGTCAGTGTGCAGACCCTCATCACGGGAGATGAGCTCGTTAGAGAAGGTCAGA 1109175
Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184
|||||||| || |||||||| || ||||| || ||||| || || || ||||| ||||||
Sbjct 1109174 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAG 1109115
Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGT 42241
|| || || || || || ||||||| || | || | | ||| ||| ||
Sbjct 1109114 ATACCCTCGACGGCAGCGAAGGCAACGAGACGGGAAGCAAAGGTAGAATCACGGTCTTGG 1109055
Query 42242 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300
||||| | || |||||||||||||| || | || || || ||||| |||||||
Sbjct 1109054 ATCCAGCGGATG-GCCCAATCGGCCTTGCGCTTGATGCAGGGAATGGTTTCAATGGCATC 1108996
Query 42301 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACAT 42360
||||| ||| | || || || || | || |||||||| | ||| || |
Sbjct 1108995 GAAGAGGTAGGTGCGTTGCTTGGGCTCCTTGATGTAGGTATCGATAAGAAGGGAGTAGGT 1108936
Query 42361 TTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAAC 42420
|| || || || || || || ||||| || || ||||| || | ||||| || ||
Sbjct 1108935 CTCGGAGTGGATATTCTCCATCATAATCTGGAAACCATAGAAGCAGCGAGCCTCAGTGAC 1108876
Query 42421 CTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGC 42480
||| || || | | || || ||| | | || || || || || |||||| ||| ||
Sbjct 1108875 CTGGACCTCAGCGCTGAAACGCTCAACAAGGTTCTCATTGACAATGCCGTCAGAGGCGGC 1108816
Query 42481 AAAAAACGC 42489
|| || ||
Sbjct 1108815 GAAGAAAGC 1108807
>seq8
Length=1820348
Score = 122 bits (134), Expect = 1e-22
Identities = 521/818 (64%), Gaps = 4/818 (0%)
Strand=Plus/Minus
Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATG 72080
|| || ||||| || ||||| || |||| || || ||| || || || | || |
Sbjct 1045971 ACACGCTTCATGAACAGATCGGGGGTCCACAGGGC-ATAGAACAGGTCACGGGCACGGAT 1045913
Query 72081 CTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 72140
||||| || || ||||| || ||||||||| | | | ||| | ||||| ||
Sbjct 1045912 TTCCTCCTTACCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGACATCCGCGTGCCATGG 1045853
Query 72141 TTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 72200
|| | ||| ||||| | | || || || |||||||| ||||| || | || | ||
Sbjct 1045852 CTCAAGGTAGATGGCAAAGGCACCGGGACGCTTGTTTCCACCCTGGTCGACATAGCGGGC 1045793
Query 72201 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGA 72260
||||| || || || | | ||| || | |||||| || || | ||| || || |||
Sbjct 1045792 TGTGTTGTTGTACACGCGGAGCATGGGGACAATACCGTTCGAGGTACCGTTAGTTCCGCC 1045733
Query 72261 GATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTT 72320
|| || ||| | || ||||| | || ||||| || || || || | ||
Sbjct 1045732 AATGTAAGAGCCAGTCGCGCGAATGCGGTGGATGTTCAGACCAATACCACCAGCAGTCTT 1045673
Query 72321 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 72380
||||| | || || || || ||||| ||||| ||||| || || || ||| ||||
Sbjct 1045672 TGAGATCATGGCACAGGTCTTCAAAGTATCGTAGATACCCTCAATGCTGTCCTCCTTCAT 1045613
Query 72381 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 72440
| || || || || | || |||| | | || || || || || | ||| ||
Sbjct 1045612 ATCAACCAGGAAGCAAGAGGCCAGTTGGGGCTGGGGGGTACCAGCGTTGAACAGGGTTGG 1045553
Query 72441 AGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTAT 72500
||||||||| || || | |||| ||||| | | ||| |||||||| || || ||
Sbjct 1045552 AGAAGCGTGAGTGAAGTACTTTTGAGACATCAAGTGGTAGGTCTCAATGGCCTTCTCAAT 1045493
Query 72501 ATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGAT 72560
|||| | || || || || || |||||||| | || |||||||| | ||| |||
Sbjct 1045492 ATCCTCTCCGTGAATACCAACAGCAACACGCATCAGCAGGTGCTGAGGACGCTCAGCGAC 1045433
Query 72561 CTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 72620
||| || || | || || || |||| || || || || || |||||||
Sbjct 1045432 TTTGCCATCAATACGGAGCAGATATGAACGCTCCAGGGTCTTGAAGCCGAAGAAGTTGTA 1045373
Query 72621 TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTAT 72680
||||| || ||||| | ||| | || || || | ||| || || |||| ||
Sbjct 1045372 GTTGAAGTCACGGTCGTAGACAATGGCGGAGTTAAGCTCATCAGCATGCTTTGTAACAAT 1045313
Query 72681 ATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGT 72739
| ||| | || || || || || |||| | || || || || || |||||||
Sbjct 1045312 CT-CATAGATATCTTTGGAGATCATAGGAGCGGGCTTGTTGTTCTTGGGGTTGACATAGT 1045254
Query 72740 TGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATA 72799
| | | || || || | |||| | || || || | |||||| || || || |
Sbjct 1045253 GGTAGAGGTCGGAGATGACCATAGAAAATTGCTTCTTGGTCTGCTTGTGAAGGTTAGACA 1045194
Query 72800 CGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGT 72837
| || || | || || || || ||||| || || |||
Sbjct 1045193 CAGCGATACGAGCTGCCAGGATAGCATAGTCGGGGTGT 1045156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138780538000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |