Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq3 125 1e-23 seq8 122 1e-22 >seq3 Length=2521181 Score = 125 bits (138), Expect = 1e-23 Identities = 287/429 (67%), Gaps = 5/429 (1%) Strand=Plus/Minus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || ||||| || ||||||||||||||| | || | ||||| || || || || Sbjct 1109234 CAGGCGAAGTCAGTGTGCAGACCCTCATCACGGGAGATGAGCTCGTTAGAGAAGGTCAGA 1109175 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 |||||||| || |||||||| || ||||| || ||||| || || || ||||| |||||| Sbjct 1109174 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAG 1109115 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGT 42241 || || || || || || ||||||| || | || | | ||| ||| || Sbjct 1109114 ATACCCTCGACGGCAGCGAAGGCAACGAGACGGGAAGCAAAGGTAGAATCACGGTCTTGG 1109055 Query 42242 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300 ||||| | || |||||||||||||| || | || || || ||||| ||||||| Sbjct 1109054 ATCCAGCGGATG-GCCCAATCGGCCTTGCGCTTGATGCAGGGAATGGTTTCAATGGCATC 1108996 Query 42301 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACAT 42360 ||||| ||| | || || || || | || |||||||| | ||| || | Sbjct 1108995 GAAGAGGTAGGTGCGTTGCTTGGGCTCCTTGATGTAGGTATCGATAAGAAGGGAGTAGGT 1108936 Query 42361 TTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAAC 42420 || || || || || || || ||||| || || ||||| || | ||||| || || Sbjct 1108935 CTCGGAGTGGATATTCTCCATCATAATCTGGAAACCATAGAAGCAGCGAGCCTCAGTGAC 1108876 Query 42421 CTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGC 42480 ||| || || | | || || ||| | | || || || || || |||||| ||| || Sbjct 1108875 CTGGACCTCAGCGCTGAAACGCTCAACAAGGTTCTCATTGACAATGCCGTCAGAGGCGGC 1108816 Query 42481 AAAAAACGC 42489 || || || Sbjct 1108815 GAAGAAAGC 1108807 >seq8 Length=1820348 Score = 122 bits (134), Expect = 1e-22 Identities = 521/818 (64%), Gaps = 4/818 (0%) Strand=Plus/Minus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATG 72080 || || ||||| || ||||| || |||| || || ||| || || || | || | Sbjct 1045971 ACACGCTTCATGAACAGATCGGGGGTCCACAGGGC-ATAGAACAGGTCACGGGCACGGAT 1045913 Query 72081 CTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 72140 ||||| || || ||||| || ||||||||| | | | ||| | ||||| || Sbjct 1045912 TTCCTCCTTACCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGACATCCGCGTGCCATGG 1045853 Query 72141 TTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 72200 || | ||| ||||| | | || || || |||||||| ||||| || | || | || Sbjct 1045852 CTCAAGGTAGATGGCAAAGGCACCGGGACGCTTGTTTCCACCCTGGTCGACATAGCGGGC 1045793 Query 72201 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGA 72260 ||||| || || || | | ||| || | |||||| || || | ||| || || ||| Sbjct 1045792 TGTGTTGTTGTACACGCGGAGCATGGGGACAATACCGTTCGAGGTACCGTTAGTTCCGCC 1045733 Query 72261 GATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTT 72320 || || ||| | || ||||| | || ||||| || || || || | || Sbjct 1045732 AATGTAAGAGCCAGTCGCGCGAATGCGGTGGATGTTCAGACCAATACCACCAGCAGTCTT 1045673 Query 72321 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 72380 ||||| | || || || || ||||| ||||| ||||| || || || ||| |||| Sbjct 1045672 TGAGATCATGGCACAGGTCTTCAAAGTATCGTAGATACCCTCAATGCTGTCCTCCTTCAT 1045613 Query 72381 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 72440 | || || || || | || |||| | | || || || || || | ||| || Sbjct 1045612 ATCAACCAGGAAGCAAGAGGCCAGTTGGGGCTGGGGGGTACCAGCGTTGAACAGGGTTGG 1045553 Query 72441 AGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTAT 72500 ||||||||| || || | |||| ||||| | | ||| |||||||| || || || Sbjct 1045552 AGAAGCGTGAGTGAAGTACTTTTGAGACATCAAGTGGTAGGTCTCAATGGCCTTCTCAAT 1045493 Query 72501 ATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGAT 72560 |||| | || || || || || |||||||| | || |||||||| | ||| ||| Sbjct 1045492 ATCCTCTCCGTGAATACCAACAGCAACACGCATCAGCAGGTGCTGAGGACGCTCAGCGAC 1045433 Query 72561 CTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 72620 ||| || || | || || || |||| || || || || || ||||||| Sbjct 1045432 TTTGCCATCAATACGGAGCAGATATGAACGCTCCAGGGTCTTGAAGCCGAAGAAGTTGTA 1045373 Query 72621 TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTAT 72680 ||||| || ||||| | ||| | || || || | ||| || || |||| || Sbjct 1045372 GTTGAAGTCACGGTCGTAGACAATGGCGGAGTTAAGCTCATCAGCATGCTTTGTAACAAT 1045313 Query 72681 ATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGT 72739 | ||| | || || || || || |||| | || || || || || ||||||| Sbjct 1045312 CT-CATAGATATCTTTGGAGATCATAGGAGCGGGCTTGTTGTTCTTGGGGTTGACATAGT 1045254 Query 72740 TGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATA 72799 | | | || || || | |||| | || || || | |||||| || || || | Sbjct 1045253 GGTAGAGGTCGGAGATGACCATAGAAAATTGCTTCTTGGTCTGCTTGTGAAGGTTAGACA 1045194 Query 72800 CGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGT 72837 | || || | || || || || ||||| || || ||| Sbjct 1045193 CAGCGATACGAGCTGCCAGGATAGCATAGTCGGGGTGT 1045156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138780538000