Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 205 1e-47 seq8 125 1e-23 >seq3 Length=2521181 Score = 205 bits (226), Expect = 1e-47 Identities = 563/849 (66%), Gaps = 33/849 (4%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||| || || ||||| | ||| ||| | |||||| Sbjct 1108678 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGATCTG 1108737 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | || ||| || |||||| | || | || Sbjct 1108738 TCCAAGGATCTTCACGACTGGCACAACCGCCTGAACGATGATGAGCGTTACTTCGTCTCT 1108797 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| || | || ||||| |||| ||| || || || ||||| || || || ||||| || Sbjct 1108798 CACGTTCTTGCTTTCTTCGCCGCCTCTGACGGCATTGTCAATGAGAACCTTGTTGAG-CG 1108856 Query 125198 ATTCTCTCAAGAGTTGA---CCATTCCA--GAGGTGTCG-TGCTTTTACGGATTCCAAAT 125251 ||| || | ||| ||| || |||| ||| ||||| || || ||||| || Sbjct 1108857 TTTC-----AGCGCTGAGGTCCAGGTCACTGAGGC-TCGCTGCTTCTATGGTTTCCAGAT 1108910 Query 125252 CATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA 125311 ||||| ||||| | ||||| || | ||||| || || || | ||||| || Sbjct 1108911 TATGATGGAGAATATCCACTCCGAGACCTACTCCCTTCTTATCGATACCTACATCAAGGA 1108970 Query 125312 TCC---GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAA 125368 || |||||| | || ||||| | || || || || | || | || Sbjct 1108971 GCCCAAGCAACGCACCTAC---CTCTTCGATGCCATTGAAACCATTCCCTGCATCAAGCG 1109027 Query 125369 AAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACT 125428 ||||| | |||| || || |||||| | ||| | ||| | | || | | || Sbjct 1109028 CAAGGCCGATTGGGCCATCCGCTGGATCCAAGACCGTGATTCTACCTTTGCTTCCCGTCT 1109087 Query 125429 GGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTG 125488 || || ||||| ||||| ||||| |||||||| || || ||| || | ||||| || Sbjct 1109088 CGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCTATCTTCTG 1109147 Query 125489 GCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGA 125548 |||||||||||| || ||||||||||| ||||| | ||||||| | || || || || Sbjct 1109148 GCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCTAACGAGCTCATCTCCCGTGA 1109207 Query 125549 CGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCGAG 125606 ||||| || ||| |||||| ||| || ||||| || || || | | | ||| || Sbjct 1109208 TGAGGGTCTGCACACTGACTTCGCCTGCCTTCTGTTCTCCCACCTGAACAACCGCCCCAG 1109267 Query 125607 TGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAA 125666 | ||| | || ||| ||| |||||| || || || | || || ||| Sbjct 1109268 ----CAAGCAG-GTTGTCCAGGACAT---CATTGT---TGAGGCTGTTGGAATTGAGCAA 1109316 Query 125667 GAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGC 125726 ||||| || || || | || || | || | ||||||||| |||||| |||||| Sbjct 1109317 GAGTTCCTGACTGACGCTCTTCCTTGCGCTCTGCTCGGCATGAACGCCAAGCTGATGTGC 1109376 Query 125727 GAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATTTAC 125786 ||||||| ||||| || || || ||||| ||| || | | || ||| ||| Sbjct 1109377 CAGTACATTGAGTTCGTCGCTGACCGTCTCCTGGTCGCTCTCGGTAACCAGAAGTACTAC 1109436 Query 125787 AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTT 125846 ||| | || ||||| || |||||| ||| || || | || ||||||||||| Sbjct 1109437 AACTCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTC 1109496 Query 125847 TTCGAGAAG 125855 ||||||||| Sbjct 1109497 TTCGAGAAG 1109505 >seq8 Length=1820348 Score = 125 bits (138), Expect = 1e-23 Identities = 300/449 (67%), Gaps = 10/449 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| || || || || || || || | ||| ||||| | || || ||||||||||| Sbjct 1045808 CAGGGTGGAAACAAGCGTCCCGGTGCCTTTGCCATCTACCTTGAGCCATGGCACGCGGAT 1045867 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA---CGAGCCAGG 96992 || || || || |||| | ||||| ||| || | | |||| | || ||| | Sbjct 1045868 GTCTTCGAGTTCCTCGACCTCCGCAAGAACCACGG---TAAGGAGGAAATCCGTGCCCGT 1045924 Query 96993 GACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGC 97052 ||| |||| ||||| || ||| || ||| ||||||||||||| ||| | | ||| Sbjct 1045925 GACCTGTTCTATGCCCTGTGGACCCCCGATCTGTTCATGAAGCGTGTCGAGTCCAATGGA 1045984 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| ||| | |||||| || | | ||||| || | ||| || ||||| ||| Sbjct 1045985 GACTGGACTCTATTCTGCCCCAACGAGGCCCCCGGCCTTGCTGATGTCTACGGCGACGAG 1046044 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGC 97171 || ||||| ||| | || ||| | |||||||| || || | | | | Sbjct 1046045 TTCGAGGCTCTCTACGAGCGTTATGAGAAGGAGGGCCGCGGCCGCTCCACCATT--AAGG 1046102 Query 97172 ACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | |||| |||||| | |||||| | ||||||| |||||||| | || | ||| | Sbjct 1046103 CCCAGAAGCTGTGGTATGCCATCCTCGAGGCTCAGACCGAGACTGGTAACCCCTTCATGC 1046162 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 |||||||||| | || || |||||||| || |||| |||||| ||| Sbjct 1046163 TCTACAAGGACGCTTGTAACAAGAAGAGCAACCAGAAGAACCTGGGTACCATCCGCAGCT 1046222 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTAC 97319 |||| |||||||| || || | |||||| Sbjct 1046223 CCAACCTGTGCACCGAGATCATCGAGTAC 1046251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058736838000