Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq7 131 1e-25 seq8 84.2 2e-11 >seq7 Length=2000612 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||||||||||| || |||||||| | ||||||||||| || Sbjct 1447482 ATGCAGATCTTCGTTAAGACTTTGACCGGCAAGACCATCACATTGGAAGTGGAGTCCTCC 1447423 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||| || || ||||| || |||||| Sbjct 1447422 GACACAATCGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAA 1447363 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| ||||| || || || | ||||||| ||||| | |||||||| Sbjct 1447362 CAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACCCTTTCGGATTACAAC 1447303 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| || || | ||||| Sbjct 1447302 ATCCAGAAGGAGTCCACTCTTCACCTGGTGCT 1447271 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| | ||||| || | ||||| | || || || || || Sbjct 1447710 ATGCAGATCTTTGTTAAGACTCTCACCGGCAAGACTATCACTTTGGAGGTTGAATCATCA 1447651 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || ||| || || || || || || ||||||||| Sbjct 1447650 GACACGATTGATAATGTGAAGAGCAAGATCCAAGATAAGGAGGGTATCCCCCCTGACCAA 1447591 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | ||||| |||||||| ||| | ||||||| ||||| | ||| ||||| Sbjct 1447590 CAACGTCTAATTTTCGCCGGCAAGCAACTTGAAGATGGCCGCACCCTTTCCGACTACAAC 1447531 Query 25179 ATTCAAAAAGAATCCAC 25195 || || || || || || Sbjct 1447530 ATCCAGAAGGAGTCTAC 1447514 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/202 (71%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || ||||| |||||||| || | ||||| | || || ||||| ||||| ||||| Sbjct 1447926 GTCAAGACCTTGACCGGCAAGACTATCACCCTTGAGGTTGAGTCCAGCGACACCATCGA- 1447868 Query 25071 TCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTA 25128 | || | ||| | || | ||| || || || || || || |||||||||||||| | | Sbjct 1447867 TAACGTCAAGTCCAAGATTCAG-GATAAGGAGGGCATCCCTCCTGACCAACAGCGTCTCA 1447809 Query 25129 TTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAG 25188 | || || || ||||| | || |||| || || || ||| |||||||| || |||| Sbjct 1447808 TCTTCGCTGGAAAACAGCTTGAGGATGGCCGTACCCTGTCCGACTACAATATCCAGAAAG 1447749 Query 25189 AATCCACGCTACATTTAGTGCT 25210 |||| || || || || || || Sbjct 1447748 AATCTACCCTTCACTTGGTCCT 1447727 Score = 82.4 bits (90), Expect = 7e-11 Identities = 128/181 (71%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG--AAGC 25080 ||||| || ||||||| | || || ||||| || |||||||| || || ||| Sbjct 1448215 ACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGATACTATCGA--CAATGTCAAGT 1448158 Query 25081 AAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCA 25140 || ||| ||||| ||||| || || |||||||||||||| | ||||| || || | Sbjct 1448157 CCAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAACAGCGTCTGATTTTCGCTGGAA 1448098 Query 25141 AACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTAC 25200 | || || || |||| ||||| | ||| || || ||||| || |||||||| || | Sbjct 1448097 AGCAGTTGGAGGATGGCCGCACCCTTTCCGACTATAACATTCAGAAGGAATCCACCCTCC 1448038 Query 25201 A 25201 | Sbjct 1448037 A 1448037 >seq8 Length=1820348 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| |||| ||||| |||| || |||| || |||||| ||||| ||| Sbjct 642586 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 642645 Query 25068 GAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127 || | ||| || ||| ||||| || || || || |||||||||||||| | Sbjct 642646 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAACAGCGCCTG 642705 Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 || || || ||||| || | || |||| |||||| || |||| ||||| || || || Sbjct 642706 ATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAGAA 642764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327735940750