Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09]
50 sequences; 33,998,198 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq3 149 7e-31
>seq3
Length=2521181
Score = 149 bits (164), Expect = 7e-31
Identities = 480/735 (65%), Gaps = 15/735 (2%)
Strand=Plus/Minus
Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGA-CGTAC 92985
||||| || || || |||||||| |||||| | ||||| || || ||| || |
Sbjct 1109399 TCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGCGTTCATGCCGAGCAGAGCGCA- 1109341
Query 92986 AGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045
||| |||||||| |||| ||| |||| ||| ||| |||| || || | ||| ||
Sbjct 1109340 AGGAAGAGCGTCAGTCAGGAACTCTTGCTCAATTCCAACAGCCTCAACAATGATGTCCTG 1109281
Query 93046 TACT--CTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTCG 93103
|| || || ||| || |||| | | | | ||| | ||| || |||||
Sbjct 1109280 GACAACCTGCTTGCTGG-GGCGGTTGTTC-AGGTGGGAGAACAGAAGGCAGGCGAAGTCA 1109223
Query 93104 GTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGT 93163
|| || | ||| || || || || || | ||| || ||| || | ||| || | ||
Sbjct 1109222 GTGTGCAGACCCTCATCACGGGAGATGAGCTCGTTAGAGAAGGTCAGACCGGGCATGAGA 1109163
Query 93164 CCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACG 93223
|| || ||||||||||| || || || || ||| ||||| || || ||||| || |||
Sbjct 1109162 CCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCGACG 1109103
Query 93224 GCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-CT--GATCCATTTT 93280
|| || || || || | ||| ||||| | |||| || | || ||||||
Sbjct 1109102 GCAGCGAAGGCAACGAGACGGGAAGCAAA---GGTAGAATCACGGTCTTGGATCCAGCGG 1109046
Query 93281 AAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAA 93340
| ||||||||||| || ||| || || || | ||||| || || | || |||||
Sbjct 1109045 ATGGCCCAATCGGCCTTGCGCTTGATGCAGGGAATGGTTTCAATGGCATCGAAGAGGTAG 1108986
Query 93341 TCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGG 93400
|| | | | || ||||| |||||||| | || || || | || || |||
Sbjct 1108985 GTGCGTTGCTTGGGCTCCTTGATGTAGGTATCGATAAGAAGGGAGTAGGTCTCGGAGTGG 1108926
Query 93401 ACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCT 93460
| ||||||||| ||| ||||| || ||||| || | ||| || |||| ||| || ||
Sbjct 1108925 ATATTCTCCATCATAATCTGGAAACCATAGAAGCAGCGAGCCTCAGTGACCTGGACCTCA 1108866
Query 93461 TGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCC 93520
|| | ||| || || || |||||||| || || || || || || || |||||
Sbjct 1108865 GCGCTGAAACGCTCAACAAGGTTCTCATTGACAATGCCGTCAGAGGCGGCGAAGAAAGCA 1108806
Query 93521 AATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCAATCGGATAGA 93577
| | || | || | ||||||||| || | | || | ||| ||| |||
Sbjct 1108805 AGAACGTGAGAGACGAAGTAACGCTCATCATCGTTCAGGCGGTTGTGCCAGTCGTGAAGA 1108746
Query 93578 TCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATA 93637
|| || || ||||| | || ||| | ||||| || || || || || || ||||||||
Sbjct 1108745 TCCTTGGACAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATT 1108686
Query 93638 TCCCATATGTCTTGA 93652
| ||| || | ||||
Sbjct 1108685 TGCCAGATCTATTGA 1108671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860451962000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |