Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3 149 7e-31 >seq3 Length=2521181 Score = 149 bits (164), Expect = 7e-31 Identities = 480/735 (65%), Gaps = 15/735 (2%) Strand=Plus/Minus Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGA-CGTAC 92985 ||||| || || || |||||||| |||||| | ||||| || || ||| || | Sbjct 1109399 TCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGCGTTCATGCCGAGCAGAGCGCA- 1109341 Query 92986 AGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045 ||| |||||||| |||| ||| |||| ||| ||| |||| || || | ||| || Sbjct 1109340 AGGAAGAGCGTCAGTCAGGAACTCTTGCTCAATTCCAACAGCCTCAACAATGATGTCCTG 1109281 Query 93046 TACT--CTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTCG 93103 || || || ||| || |||| | | | | ||| | ||| || ||||| Sbjct 1109280 GACAACCTGCTTGCTGG-GGCGGTTGTTC-AGGTGGGAGAACAGAAGGCAGGCGAAGTCA 1109223 Query 93104 GTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGT 93163 || || | ||| || || || || || | ||| || ||| || | ||| || | || Sbjct 1109222 GTGTGCAGACCCTCATCACGGGAGATGAGCTCGTTAGAGAAGGTCAGACCGGGCATGAGA 1109163 Query 93164 CCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACG 93223 || || ||||||||||| || || || || ||| ||||| || || ||||| || ||| Sbjct 1109162 CCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCGACG 1109103 Query 93224 GCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-CT--GATCCATTTT 93280 || || || || || | ||| ||||| | |||| || | || |||||| Sbjct 1109102 GCAGCGAAGGCAACGAGACGGGAAGCAAA---GGTAGAATCACGGTCTTGGATCCAGCGG 1109046 Query 93281 AAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAA 93340 | ||||||||||| || ||| || || || | ||||| || || | || ||||| Sbjct 1109045 ATGGCCCAATCGGCCTTGCGCTTGATGCAGGGAATGGTTTCAATGGCATCGAAGAGGTAG 1108986 Query 93341 TCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGG 93400 || | | | || ||||| |||||||| | || || || | || || ||| Sbjct 1108985 GTGCGTTGCTTGGGCTCCTTGATGTAGGTATCGATAAGAAGGGAGTAGGTCTCGGAGTGG 1108926 Query 93401 ACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCT 93460 | ||||||||| ||| ||||| || ||||| || | ||| || |||| ||| || || Sbjct 1108925 ATATTCTCCATCATAATCTGGAAACCATAGAAGCAGCGAGCCTCAGTGACCTGGACCTCA 1108866 Query 93461 TGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCC 93520 || | ||| || || || |||||||| || || || || || || || ||||| Sbjct 1108865 GCGCTGAAACGCTCAACAAGGTTCTCATTGACAATGCCGTCAGAGGCGGCGAAGAAAGCA 1108806 Query 93521 AATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCAATCGGATAGA 93577 | | || | || | ||||||||| || | | || | ||| ||| ||| Sbjct 1108805 AGAACGTGAGAGACGAAGTAACGCTCATCATCGTTCAGGCGGTTGTGCCAGTCGTGAAGA 1108746 Query 93578 TCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATA 93637 || || || ||||| | || ||| | ||||| || || || || || || |||||||| Sbjct 1108745 TCCTTGGACAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATT 1108686 Query 93638 TCCCATATGTCTTGA 93652 | ||| || | |||| Sbjct 1108685 TGCCAGATCTATTGA 1108671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860451962000