Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq3 134 3e-26 seq5 105 1e-17 seq6 100 6e-16 >seq3 Length=2521181 Score = 134 bits (148), Expect = 3e-26 Identities = 537/832 (65%), Gaps = 35/832 (4%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||| ||||| ||||||||||||||||||||| | Sbjct 1109501 TCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGCA 1109442 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | ||||| | ||| | | || || || || | || ||||| || || ||||| | Sbjct 1109441 GAGTTGTAGTACTTCTGGTTACCGAGAGCGACCAGGAGACGGTCAGCGACGAACTCAATG 1109382 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | |||||| | | ||||||||| | || | ||||||| || ||| | | Sbjct 1109381 TACTGGCACATCAGCTTGGCGTTCATGCCGAGCAGAGCGCAAGGAAGAGCGTCAGTCAGG 1109322 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG-TGCCAGAGA 251798 || || | || | |||| ||||| | | || ||| ||||| | | | | Sbjct 1109321 AACTCTTGCTCAATTCCAACAGCCTCAACAATGATGTCCTGGACAACCTGCTTGCTGGGG 1109262 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858 | | ||||| ||| | ||| |||| || | | || | |||||||||||| || Sbjct 1109261 C-GGTTGTT---CAGGTGGGAGAACAGAAGGCAGGCGAAGTCAGTGTGCAGACCCTCATC 1109206 Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918 || ||||| |||||| || | ||| || ||||| | ||||| ||| ||||||| Sbjct 1109205 ACGGGAGATGAGCTCGTTAGAGAAGGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCA 1109146 Query 251919 GAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAG 251978 |||||| | | || || |||||||| | | ||||||||| | | ||||| || Sbjct 1109145 GAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCGACGGCAGCGAAGGCAACGAG 1109086 Query 251979 GCGCTCAGCAAA---CGACT---TGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTT 252032 || |||||| || | ||| || | || | || ||||| | ||||| Sbjct 1109085 ACGGGAAGCAAAGGTAGAATCACGGTCTTGGATCCAG--CGGATG-GCCCAATCGGCCTT 1109029 Query 252033 ---CTT--TCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCA 252087 ||| | || ||| || ||||| || ||||| ||||| || | || | || Sbjct 1109028 GCGCTTGATGCA-----GGGAATGGTTTCAATGGCATCGAAGAGGTAGGTGCGTT--GCT 1108976 Query 252088 TCG--TCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGT 252145 | | |||| |||| | ||| | || || ||||| |||| || ||||| || Sbjct 1108975 TGGGCTCCTTGATGTAGGTATCGATAAGAAGGGAGTAGGTCTCGGAGTGGATATTCTCCA 1108916 Query 252146 TGAACATCTGGTAAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTC--CGTGGAAAA 252203 | | |||||| || ||||||| || || || | | ||| || || |||| Sbjct 1108915 TCATAATCTGGAAACCATAGAAGCAGCGAGCCTCAGTGACCTGGACCTCAGCGCTGAAAC 1108856 Query 252204 GTTGTTTGCAATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGT 252263 | | ||| |||||| | || ||||| || | | || ||||| |||||| | Sbjct 1108855 G--CTCAACAAGGTTCTCATTGACAATGCCGTCAGAGGCGGCGAAGAAAGCAAGAACGTG 1108798 Query 252264 CTTGATGAAGTGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATT 252323 || ||||| ||||||||| ||||| || || |||||||| || |||| Sbjct 1108797 AGAGACGAAGTAACGCTCATCATCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGA 1108738 Query 252324 CAGAGGAACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACATT 252375 |||| || || || | |||||||| | | | | ||||||||||||||| Sbjct 1108737 CAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATT 1108686 >seq5 Length=2355544 Score = 105 bits (116), Expect = 1e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||| |||||||| |||| ||||| || || ||||||| ||||||||||| ||| Sbjct 376452 GGTGTTGATCTGTGCAACTGCACCTTCTCCCTGGCCTATGGTGCCAAGATTCTGCTGAAC 376511 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | ||| |||||||||| | || || ||||| |||||||||| || | Sbjct 376512 CAGACTCACCTGCGTCTCAAGCGTGGTCAGCGTTACGGTCTGCTCGGTCCCAACGGTTCC 376571 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 ||||||| |||||| ||||| || || |||| ||||| || || || || || Sbjct 376572 GGTAAGACCACTCTCATGCGTGCTATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAG 376631 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGAC 279557 |||||| | ||| || || || ||||||||| Sbjct 376632 GATGAGGTCAAGACCGTCTACGTCGAGCACGAC 376664 >seq6 Length=2103670 Score = 100 bits (110), Expect = 6e-16 Identities = 181/264 (69%), Gaps = 3/264 (1%) Strand=Plus/Minus Query 279692 GCCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCT 279751 ||| || || || ||||| |||||||||||||||||||| || || |||| ||||| || Sbjct 1246091 GCCTGTCGGCTCCCTGTCTGGTGGTTGGAAGATGAAGCTCGCTCTGGCTCGTGCCATGCT 1246032 Query 279752 ACTGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGT 279811 ||| |||||||| || || ||||| || || || ||||| |||| | ||||| Sbjct 1246031 TCTGAAGGCCGATGTTCTGCTTCTTGACGAACCTACTAACCATCTGGATGTTGCGAACGT 1245972 Query 279812 AGCCTGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCA 279871 ||||| | ||||| | | | | | | || | | || || ||||| Sbjct 1245971 CAAGTGGCTGCAGGAGTACCTCAAGAAGCACACCGACATCACTAGCTTGATCGTGTCTCA 1245912 Query 279872 CGACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAA 279931 ||||||||||||||| || | || ||| | | |||| ||||| |||||||| ||| Sbjct 1245911 CGACTCTGGCTTCCTTGACGAGGTCTGCACCGACATCTACCACTACGAGCAAAA---GAA 1245855 Query 279932 GCTCTCCAAGCACATCGGCAACCT 279955 ||| ||| || ||| ||||| Sbjct 1245854 GCTGGTCAACTACCCCGGTAACCT 1245831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836141542050