Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq7 163 5e-35 seq3 125 1e-23 seq8 123 5e-23 seq5 104 4e-17 seq6 100 5e-16 seq2 86.0 1e-11 >seq7 Length=2000612 Score = 163 bits (180), Expect = 5e-35 Identities = 177/235 (75%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| | || || ||||| || | |||| ||| || |||||||| || |||||||| | Sbjct 1447248 TTTACTGACCACCCCGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGT 1447307 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 |||| || || || | |||||||| | |||||| || || || || || | ||||||| Sbjct 1447308 AATCCGAAAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGT 1447367 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 |||| ||||| || |||||||| || ||||| ||| ||| ||||| ||||| | | Sbjct 1447368 CGGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATTGTGTCGGAGG 1447427 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || |||||||| |||||||| || || || | ||||| ||||| |||||||| Sbjct 1447428 ACTCCACTTCCAATGTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 1447482 Score = 147 bits (162), Expect = 4e-30 Identities = 165/218 (76%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| || || || ||||| ||||| || || ||||| Sbjct 1447712 CCACCACGCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATATTGTAGTCGGAC 1447771 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||| || || ||||| ||||| | |||||||| || || Sbjct 1447772 AGGGTACGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGTTGGTCAGGAGGG 1447831 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 ||||| ||||| || |||||||| | ||||||| ||||||||||| ||| || || || Sbjct 1447832 ATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTC-GCTGGACTCAAC 1447890 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | |||||| || || || || | ||||||||||| Sbjct 1447891 CTCAAGGGTGATAGTCTTGCCGGTCAAGGTCTTGACGA 1447928 Score = 134 bits (148), Expect = 3e-26 Identities = 155/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||||| |||| ||| || ||||| || || || |||||||| ||||| Sbjct 1448013 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAA 1448072 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || |||||||| || ||||| || || | |||||||| || || Sbjct 1448073 AGGGTGCGGCCATCCTCCAACTGCTTTCCAGCGAAAATCAGACGCTGTTGGTCAGGAGGG 1448132 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 |||||||||||||| || ||||| | |||||| ||||| || || ||| || || || Sbjct 1448133 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATC-GCTGGACTCGAC 1448191 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGA 68439 || | |||||||| || || |||| Sbjct 1448192 CTCAAGAGTGATGGTCTTGCCGGTGA 1448217 >seq3 Length=2521181 Score = 125 bits (138), Expect = 1e-23 Identities = 293/439 (67%), Gaps = 6/439 (1%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||| || || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 1109538 CATAACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 1109479 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||||| ||| |||||||||||| |||||||| | | | | | ||| ||| ||| Sbjct 1109478 CAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTGGTTACC 1109419 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | |||||||| |||||||| |||||||||| |||||| | | ||| Sbjct 1109418 GAGAGCGACCAGGAGACGGTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGCGTT 1109359 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | || ||| || | ||||| | ||| || | || | | || || Sbjct 1109358 CATGCCGAGCAGAGCGCAAGGAAGAGCGTCAGTCAGGAACTCTTGCTCAATTCCAACAGC 1109299 Query 10175 TTCCTCGACGATGCTCTTTACCACGT-CAAG--GGACAGCTTGTTCTCGAGCTTCGAATA 10231 || | | |||| || || || | | | || | |||||| || | || | Sbjct 1109298 CTCAACAATGATGTCCTGGACAACCTGCTTGCTGGGGCGGTTGTTC---AGGTGGGAGAA 1109242 Query 10232 CAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAA 10291 ||| || | || | ||| || ||||| || ||| ||||| |||||| || || Sbjct 1109241 CAGAAGGCAGGCGAAGTCAGTGTGCAGACCCTCATCACGGGAGATGAGCTCGTTAGAGAA 1109182 Query 10292 ACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGA 10351 ||||||||||||||| || || || |||||||| || | | ||| || || || Sbjct 1109181 GGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGA 1109122 Query 10352 GAACAGAAGACCCTCCACG 10370 ||| | | |||||| ||| Sbjct 1109121 GAAGAAGATACCCTCGACG 1109103 >seq8 Length=1820348 Score = 123 bits (136), Expect = 5e-23 Identities = 137/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| || ||||| || Sbjct 642764 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 642705 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | |||||||| || || || || |||||||| || ||||| | ||||||| ||| Sbjct 642704 AGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 642645 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 642644 ATGGTGTC-GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 642586 >seq5 Length=2355544 Score = 104 bits (114), Expect = 4e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 225770 GCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCC 225829 || || | |||||| || ||||| || ||| || || | | |||||| ||||| Sbjct 376672 GCATCCAGGTCGTGCTCGACGTAGACGGTCTTGACCTCATCCTTCTTGGGGAAACCCTCA 376613 Query 225830 AGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATG 225889 ||||| | || || ||||| | || || |||| || | ||||||||||||| Sbjct 376612 AGCTGCTCGTTGTTGATAGCACGCATGAGAGTGGTCTTACCGGAACCGTTGGGACCGAGC 376553 Query 225890 AGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCA 225949 || |||||| | | || ||||||| ||| | || |||||| || |||||| || Sbjct 376552 AGACCGTAACGCTGACCACGCTTGAGACGCAGGTGAGTCTGGTTCAGCAGAATCTTGGCA 376493 Query 225950 CCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 |||||||| |||||||| ||| | |||||| || |||||||||| Sbjct 376492 CCATAGGCCAGGGAGAAGGTGCAGTTGCACAGATCAACACCCTCCTC 376446 Score = 95.1 bits (104), Expect = 2e-14 Identities = 143/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 224465 ACACCGCCGCCGAATGACTCAAGGGCGGATGAAAGCGCGCCAAGCGACTCGCGGTCAAGG 224524 ||||| || |||| |||| ||||| || || || || || || || ||||| ||| Sbjct 378025 ACACCACCCTCGAAGGACTTCAGGGCCTTGGACAGAGCACCCAGGGAGTCACGGTCCAGG 377966 Query 224525 AAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCCACAGGGC-TGCACCAAC 224583 |||| || ||||||||||||| ||| |||||||| | ||||| || || ||| ||| Sbjct 377965 TAGTTAGTAGGCTCATCCAGGACGATGACGTGGGGACGTTGCCA-AGAGCAGGCAGCAAG 377907 Query 224584 CACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGCGAGTGAGTCGTGAATTC 224643 || | ||| || |||||| || || || ||||| || || ||||||| | || Sbjct 377906 GACGACCTTGACACGCTGACCACCGGACAGACCGCGCATGCGGGAGTGAGAGACAAGCTC 377847 Query 224644 GGGGTCAAGACCAATCTTGGC 224664 || ||| ||||| | ||||| Sbjct 377846 GGCGTCCAGACCGAAGTTGGC 377826 >seq6 Length=2103670 Score = 100 bits (110), Expect = 5e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 225436 GCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAG 225495 ||| || |||||||||||||||||||||| ||||| || | | | | || || | Sbjct 1245884 GCAGACCTCGTCAAGGAAGCCAGAGTCGTGAGACACGATCAAGCTAGTGATGTCGGTGTG 1245943 Query 225496 GCCCTTGAGGTGCGTGATG-AGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTT 225554 |||||||| | | || ||||| ||||| || |||| ||||| ||||||| Sbjct 1245944 CTTCTTGAGGTAC-TCCTGCAGCCACTTGACGTTCGCAACATCCAGATGGTTAGTAGGTT 1246002 Query 225555 CGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTT 225614 |||| |||||||| | || || | | || ||||| || | |||| |||||||| | Sbjct 1246003 CGTCAAGAAGCAGAACATCGGCCTTCAGAAGCATGGCACGAGCCAGAGCGAGCTTCATCT 1246062 Query 225615 TCCAGCCCCCGGACAGGGAGCCGA 225638 |||| || || ||||||||||||| Sbjct 1246063 TCCAACCACCAGACAGGGAGCCGA 1246086 >seq2 Length=3417088 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||| | |||||| ||||||||||| | || || || || | ||||||||| Sbjct 664818 TGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCAAGGGTGATGGTC 664877 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || |||||||||||||||||||| |||||||| Sbjct 664878 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 664909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621823986000