Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09]
50 sequences; 33,998,198 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq7 163 5e-35
seq3 125 1e-23
seq8 123 5e-23
seq5 104 4e-17
seq6 100 5e-16
seq2 86.0 1e-11
>seq7
Length=2000612
Score = 163 bits (180), Expect = 5e-35
Identities = 177/235 (75%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286
|||| | || || ||||| || | |||| ||| || |||||||| || |||||||| |
Sbjct 1447248 TTTACTGACCACCCCGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGT 1447307
Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346
|||| || || || | |||||||| | |||||| || || || || || | |||||||
Sbjct 1447308 AATCCGAAAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGT 1447367
Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406
|||| ||||| || |||||||| || ||||| ||| ||| ||||| ||||| | |
Sbjct 1447368 CGGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATTGTGTCGGAGG 1447427
Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || |||||||| |||||||| || || || | ||||| ||||| ||||||||
Sbjct 1447428 ACTCCACTTCCAATGTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 1447482
Score = 147 bits (162), Expect = 4e-30
Identities = 165/218 (76%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| |||||||| || || || ||||| ||||| || || |||||
Sbjct 1447712 CCACCACGCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATATTGTAGTCGGAC 1447771
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | ||| || || ||||| ||||| | |||||||| || ||
Sbjct 1447772 AGGGTACGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGTTGGTCAGGAGGG 1447831
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
||||| ||||| || |||||||| | ||||||| ||||||||||| ||| || || ||
Sbjct 1447832 ATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTC-GCTGGACTCAAC 1447890
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451
|| | |||||| || || || || | |||||||||||
Sbjct 1447891 CTCAAGGGTGATAGTCTTGCCGGTCAAGGTCTTGACGA 1447928
Score = 134 bits (148), Expect = 3e-26
Identities = 155/206 (75%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||||| |||| ||| || ||||| || || || |||||||| |||||
Sbjct 1448013 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAA 1448072
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || |||||||| || ||||| || || | |||||||| || ||
Sbjct 1448073 AGGGTGCGGCCATCCTCCAACTGCTTTCCAGCGAAAATCAGACGCTGTTGGTCAGGAGGG 1448132
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
|||||||||||||| || ||||| | |||||| ||||| || || ||| || || ||
Sbjct 1448133 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATC-GCTGGACTCGAC 1448191
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | |||||||| || || ||||
Sbjct 1448192 CTCAAGAGTGATGGTCTTGCCGGTGA 1448217
>seq3
Length=2521181
Score = 125 bits (138), Expect = 1e-23
Identities = 293/439 (67%), Gaps = 6/439 (1%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
||| || || ||||||||||| || || || |||||||||||||| |||||| |
Sbjct 1109538 CATAACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 1109479
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
||||| ||| |||||||||||| |||||||| | | | | | ||| ||| |||
Sbjct 1109478 CAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTGGTTACC 1109419
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
||| || | | |||||||| |||||||| |||||||||| |||||| | | |||
Sbjct 1109418 GAGAGCGACCAGGAGACGGTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGCGTT 1109359
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174
|||||| | || ||| || | ||||| | ||| || | || | | || ||
Sbjct 1109358 CATGCCGAGCAGAGCGCAAGGAAGAGCGTCAGTCAGGAACTCTTGCTCAATTCCAACAGC 1109299
Query 10175 TTCCTCGACGATGCTCTTTACCACGT-CAAG--GGACAGCTTGTTCTCGAGCTTCGAATA 10231
|| | | |||| || || || | | | || | |||||| || | || |
Sbjct 1109298 CTCAACAATGATGTCCTGGACAACCTGCTTGCTGGGGCGGTTGTTC---AGGTGGGAGAA 1109242
Query 10232 CAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAA 10291
||| || | || | ||| || ||||| || ||| ||||| |||||| || ||
Sbjct 1109241 CAGAAGGCAGGCGAAGTCAGTGTGCAGACCCTCATCACGGGAGATGAGCTCGTTAGAGAA 1109182
Query 10292 ACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGA 10351
||||||||||||||| || || || |||||||| || | | ||| || || ||
Sbjct 1109181 GGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGA 1109122
Query 10352 GAACAGAAGACCCTCCACG 10370
||| | | |||||| |||
Sbjct 1109121 GAAGAAGATACCCTCGACG 1109103
>seq8
Length=1820348
Score = 123 bits (136), Expect = 5e-23
Identities = 137/180 (76%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||| || || | ||||| || | |||||| || ||||| ||
Sbjct 642764 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 642705
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | |||||||| || || || || |||||||| || ||||| | ||||||| |||
Sbjct 642704 AGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 642645
Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| ||| || || || || | ||| ||||| || ||||| ||||||||||||||
Sbjct 642644 ATGGTGTC-GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 642586
>seq5
Length=2355544
Score = 104 bits (114), Expect = 4e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 225770 GCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCC 225829
|| || | |||||| || ||||| || ||| || || | | |||||| |||||
Sbjct 376672 GCATCCAGGTCGTGCTCGACGTAGACGGTCTTGACCTCATCCTTCTTGGGGAAACCCTCA 376613
Query 225830 AGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATG 225889
||||| | || || ||||| | || || |||| || | |||||||||||||
Sbjct 376612 AGCTGCTCGTTGTTGATAGCACGCATGAGAGTGGTCTTACCGGAACCGTTGGGACCGAGC 376553
Query 225890 AGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCA 225949
|| |||||| | | || ||||||| ||| | || |||||| || |||||| ||
Sbjct 376552 AGACCGTAACGCTGACCACGCTTGAGACGCAGGTGAGTCTGGTTCAGCAGAATCTTGGCA 376493
Query 225950 CCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996
|||||||| |||||||| ||| | |||||| || ||||||||||
Sbjct 376492 CCATAGGCCAGGGAGAAGGTGCAGTTGCACAGATCAACACCCTCCTC 376446
Score = 95.1 bits (104), Expect = 2e-14
Identities = 143/201 (71%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 224465 ACACCGCCGCCGAATGACTCAAGGGCGGATGAAAGCGCGCCAAGCGACTCGCGGTCAAGG 224524
||||| || |||| |||| ||||| || || || || || || || ||||| |||
Sbjct 378025 ACACCACCCTCGAAGGACTTCAGGGCCTTGGACAGAGCACCCAGGGAGTCACGGTCCAGG 377966
Query 224525 AAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCCACAGGGC-TGCACCAAC 224583
|||| || ||||||||||||| ||| |||||||| | ||||| || || ||| |||
Sbjct 377965 TAGTTAGTAGGCTCATCCAGGACGATGACGTGGGGACGTTGCCA-AGAGCAGGCAGCAAG 377907
Query 224584 CACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGCGAGTGAGTCGTGAATTC 224643
|| | ||| || |||||| || || || ||||| || || ||||||| | ||
Sbjct 377906 GACGACCTTGACACGCTGACCACCGGACAGACCGCGCATGCGGGAGTGAGAGACAAGCTC 377847
Query 224644 GGGGTCAAGACCAATCTTGGC 224664
|| ||| ||||| | |||||
Sbjct 377846 GGCGTCCAGACCGAAGTTGGC 377826
>seq6
Length=2103670
Score = 100 bits (110), Expect = 5e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 225436 GCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAG 225495
||| || |||||||||||||||||||||| ||||| || | | | | || || |
Sbjct 1245884 GCAGACCTCGTCAAGGAAGCCAGAGTCGTGAGACACGATCAAGCTAGTGATGTCGGTGTG 1245943
Query 225496 GCCCTTGAGGTGCGTGATG-AGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTT 225554
|||||||| | | || ||||| ||||| || |||| ||||| |||||||
Sbjct 1245944 CTTCTTGAGGTAC-TCCTGCAGCCACTTGACGTTCGCAACATCCAGATGGTTAGTAGGTT 1246002
Query 225555 CGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTT 225614
|||| |||||||| | || || | | || ||||| || | |||| |||||||| |
Sbjct 1246003 CGTCAAGAAGCAGAACATCGGCCTTCAGAAGCATGGCACGAGCCAGAGCGAGCTTCATCT 1246062
Query 225615 TCCAGCCCCCGGACAGGGAGCCGA 225638
|||| || || |||||||||||||
Sbjct 1246063 TCCAACCACCAGACAGGGAGCCGA 1246086
>seq2
Length=3417088
Score = 86.0 bits (94), Expect = 1e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|| ||||| | |||||| ||||||||||| | || || || || | |||||||||
Sbjct 664818 TGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCAAGGGTGATGGTC 664877
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| |||||||||||||||||||| ||||||||
Sbjct 664878 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 664909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621823986000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |