Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09]
50 sequences; 33,998,198 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq7 131 4e-25
seq8 116 9e-21
seq3 96.9 8e-15
>seq7
Length=2000612
Score = 131 bits (144), Expect = 4e-25
Identities = 138/182 (76%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
|||||| |||||||| ||||||| || || || || || || | |||||||| |||||
Sbjct 1447747 TTCTTTCTGGATATTGTAGTCGGACAGGGTACGGCCATCCTCAAGCTGTTTTCCAGCGAA 1447806
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| ||||||||||| | ||||| || || |||||||| || || | || |||||
Sbjct 1447807 GATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTGACGTT 1447866
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | ||||| || || || || || ||||| ||||| ||||||| ||||||||
Sbjct 1447867 ATCGATGGTGTCGCTGGACTCAACCTCAAGGGTGATAGTCTTGCCGGTCAAGGTCTTGAC 1447926
Query 288462 GA 288463
||
Sbjct 1447927 GA 1447928
Score = 123 bits (136), Expect = 6e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || || || | ||| ||| || || || ||||||||||
Sbjct 1448013 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAA 1448072
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || || || ||||| ||||| |||||||||||||| | |||
Sbjct 1448073 AGGGTGCGGCCATCCTCCAACTGCTTTCCAGCGAAAATCAGACGCTGTTGGTCAGGAGGG 1448132
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || |||||||| || | || || || || |||| |||||| || || ||
Sbjct 1448133 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGCTGGACTCGACC 1448192
Query 288427 TCGAGCGTGATCGTCTTCCCGGT 288449
|| || ||||| ||||| |||||
Sbjct 1448193 TCAAGAGTGATGGTCTTGCCGGT 1448215
Score = 114 bits (126), Expect = 3e-20
Identities = 168/234 (72%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| ||||| || || | || || || |||| ||| || || ||||| || || ||
Sbjct 1447253 TGACCACCCCGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCC 1447312
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
| || ||||| || ||||| | || || || || ||||| ||||||||||| ||
Sbjct 1447313 GAAAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTG---GTCG 1447369
Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGA 288419
||| || || || || |||||||| || ||| |||||||| || || | ||| ||
Sbjct 1447370 GGGGGAATACCCTCCTTGTCCTGGATCTT-GCTCTTCACGTTGTCGATTGTGTCGGAGGA 1447428
Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| | ||||| ||||| ||||||| |||||| ||||| ||||||||
Sbjct 1447429 CTCCACTTCCAATGTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 1447482
>seq8
Length=1820348
Score = 116 bits (128), Expect = 9e-21
Identities = 133/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || |||||| || ||||| || || || | || || || |||||||||
Sbjct 642764 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 642705
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
|| |||||||| | ||||| || || || |||||||| || | || ||||| ||
Sbjct 642704 AGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 642645
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | |||||||| || || ||||| || || ||||| || ||||| |||||||||||
Sbjct 642644 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 642586
>seq3
Length=2521181
Score = 96.9 bits (106), Expect = 8e-15
Identities = 158/225 (70%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 269117 AAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGA 269176
|||||||| | ||||||| | || || || || |||| ||||| ||| | || |||
Sbjct 1109315 AAGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTGCTCGGCATGAACGCCAAGCTGATGT 1109374
Query 269177 ATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGT 269236
|| || || || ||||| ||||| ||| || | || |||||| | |||| |
Sbjct 1109375 GCCAGTACATTGAGTTCGTCGCTGACCGTCTCCTGGTCGCTCTCGGTAACCAGAAGTACT 1109434
Query 269237 ACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACT 269296
|||| || || ||||||| ||| ||||| || || || | || ||||| ||||
Sbjct 1109435 ACAACTCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACT 1109494
Query 269297 TCTTCGAAAAGCGTGTCAGCGACTATCA-ACGTCCTGGTGTAATG 269340
||||||| ||||||||| | ||||| || | | || ||||| |||
Sbjct 1109495 TCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCC-GGTGTTATG 1109538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179653644283900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |