Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq7 131 4e-25 seq8 116 9e-21 seq3 96.9 8e-15 >seq7 Length=2000612 Score = 131 bits (144), Expect = 4e-25 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| |||||||| ||||||| || || || || || || | |||||||| ||||| Sbjct 1447747 TTCTTTCTGGATATTGTAGTCGGACAGGGTACGGCCATCCTCAAGCTGTTTTCCAGCGAA 1447806 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| ||||||||||| | ||||| || || |||||||| || || | || ||||| Sbjct 1447807 GATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTGACGTT 1447866 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||||| || || || || || ||||| ||||| ||||||| |||||||| Sbjct 1447867 ATCGATGGTGTCGCTGGACTCAACCTCAAGGGTGATAGTCTTGCCGGTCAAGGTCTTGAC 1447926 Query 288462 GA 288463 || Sbjct 1447927 GA 1447928 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||| ||| || || || |||||||||| Sbjct 1448013 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAA 1448072 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || || || ||||| ||||| |||||||||||||| | ||| Sbjct 1448073 AGGGTGCGGCCATCCTCCAACTGCTTTCCAGCGAAAATCAGACGCTGTTGGTCAGGAGGG 1448132 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || | || || || || |||| |||||| || || || Sbjct 1448133 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGCTGGACTCGACC 1448192 Query 288427 TCGAGCGTGATCGTCTTCCCGGT 288449 || || ||||| ||||| ||||| Sbjct 1448193 TCAAGAGTGATGGTCTTGCCGGT 1448215 Score = 114 bits (126), Expect = 3e-20 Identities = 168/234 (72%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| || || | || || || |||| ||| || || ||||| || || || Sbjct 1447253 TGACCACCCCGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCC 1447312 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | || ||||| || ||||| | || || || || ||||| ||||||||||| || Sbjct 1447313 GAAAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTG---GTCG 1447369 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGA 288419 ||| || || || || |||||||| || ||| |||||||| || || | ||| || Sbjct 1447370 GGGGGAATACCCTCCTTGTCCTGGATCTT-GCTCTTCACGTTGTCGATTGTGTCGGAGGA 1447428 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| | ||||| ||||| ||||||| |||||| ||||| |||||||| Sbjct 1447429 CTCCACTTCCAATGTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 1447482 >seq8 Length=1820348 Score = 116 bits (128), Expect = 9e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || ||||| || || || | || || || ||||||||| Sbjct 642764 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 642705 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 || |||||||| | ||||| || || || |||||||| || | || ||||| || Sbjct 642704 AGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 642645 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | |||||||| || || ||||| || || ||||| || ||||| ||||||||||| Sbjct 642644 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 642586 >seq3 Length=2521181 Score = 96.9 bits (106), Expect = 8e-15 Identities = 158/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 269117 AAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGA 269176 |||||||| | ||||||| | || || || || |||| ||||| ||| | || ||| Sbjct 1109315 AAGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTGCTCGGCATGAACGCCAAGCTGATGT 1109374 Query 269177 ATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGT 269236 || || || || ||||| ||||| ||| || | || |||||| | |||| | Sbjct 1109375 GCCAGTACATTGAGTTCGTCGCTGACCGTCTCCTGGTCGCTCTCGGTAACCAGAAGTACT 1109434 Query 269237 ACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACT 269296 |||| || || ||||||| ||| ||||| || || || | || ||||| |||| Sbjct 1109435 ACAACTCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACT 1109494 Query 269297 TCTTCGAAAAGCGTGTCAGCGACTATCA-ACGTCCTGGTGTAATG 269340 ||||||| ||||||||| | ||||| || | | || ||||| ||| Sbjct 1109495 TCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCC-GGTGTTATG 1109538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653644283900