Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09]
50 sequences; 33,998,198 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq6 114 3e-20
seq3 98.7 2e-15
>seq6
Length=2103670
Score = 114 bits (126), Expect = 3e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 333794 GGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTT 333853
|||||| || |||| ||||| || |||||||| ||||| |||| || | | ||| |
Sbjct 1245881 GGTGCAGACCTCGTCAAGGAAGCCAGAGTCGTGAGACACGATCAAGCTAGTGATGTCGGT 1245940
Query 333854 AAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGG 333913
| || | ||||| || ||||||| | ||||| | ||| |||||||| || ||
Sbjct 1245941 GTGCTTCTTGAGGTACTCCTGCAGCCACTTGACGTTCGCAACATCCAGATGGTTAGTAGG 1246000
Query 333914 CTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCAT 333973
||||||||||| || | | || ||||| ||||| ||||| || |||||||| |||||
Sbjct 1246001 TTCGTCAAGAAGCAGAACATCGGCCTTCAGAAGCATGGCACGAGCCAGAGCGAGCTTCAT 1246060
Query 333974 TTTCCACCCTCCTGAAAG 333991
||||| || || || ||
Sbjct 1246061 CTTCCAACCACCAGACAG 1246078
>seq3
Length=2521181
Score = 98.7 bits (108), Expect = 2e-15
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 243544 GACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAA 243603
|||||| |||| ||| || | ||||||||| | | || ||| | |||||||| ||
Sbjct 1109329 GACGCTCTTCCTTGCGCTCTGCTCGGCATGAACGCCAAGCTGATGTGCCAGTACATTGAG 1109388
Query 243604 TTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAAC 243663
||||| || ||||| | | |||| || ||| | |||| |||||||| |||
Sbjct 1109389 TTCGTCGCTGACCGTCTCCTGGTCGCTCTCGGTAACCAGAAGTACTACAACTCTGCCAAC 1109448
Query 243664 CCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGT 243723
||||| | ||| |||||| ||| || || || || || ||||||||||| ||||||
Sbjct 1109449 CCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGT 1109508
Query 243724 GTCAGTGATTATCA-ACGCCCTGGTGTGATG 243753
||| |||| || || | | || ||||| |||
Sbjct 1109509 GTCGGTGACTACCAGAAGGCC-GGTGTTATG 1109538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879293467500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |