Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq6 114 3e-20 seq3 98.7 2e-15 >seq6 Length=2103670 Score = 114 bits (126), Expect = 3e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 333794 GGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTT 333853 |||||| || |||| ||||| || |||||||| ||||| |||| || | | ||| | Sbjct 1245881 GGTGCAGACCTCGTCAAGGAAGCCAGAGTCGTGAGACACGATCAAGCTAGTGATGTCGGT 1245940 Query 333854 AAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGG 333913 | || | ||||| || ||||||| | ||||| | ||| |||||||| || || Sbjct 1245941 GTGCTTCTTGAGGTACTCCTGCAGCCACTTGACGTTCGCAACATCCAGATGGTTAGTAGG 1246000 Query 333914 CTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCAT 333973 ||||||||||| || | | || ||||| ||||| ||||| || |||||||| ||||| Sbjct 1246001 TTCGTCAAGAAGCAGAACATCGGCCTTCAGAAGCATGGCACGAGCCAGAGCGAGCTTCAT 1246060 Query 333974 TTTCCACCCTCCTGAAAG 333991 ||||| || || || || Sbjct 1246061 CTTCCAACCACCAGACAG 1246078 >seq3 Length=2521181 Score = 98.7 bits (108), Expect = 2e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 243544 GACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAA 243603 |||||| |||| ||| || | ||||||||| | | || ||| | |||||||| || Sbjct 1109329 GACGCTCTTCCTTGCGCTCTGCTCGGCATGAACGCCAAGCTGATGTGCCAGTACATTGAG 1109388 Query 243604 TTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAAC 243663 ||||| || ||||| | | |||| || ||| | |||| |||||||| ||| Sbjct 1109389 TTCGTCGCTGACCGTCTCCTGGTCGCTCTCGGTAACCAGAAGTACTACAACTCTGCCAAC 1109448 Query 243664 CCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGT 243723 ||||| | ||| |||||| ||| || || || || || ||||||||||| |||||| Sbjct 1109449 CCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGT 1109508 Query 243724 GTCAGTGATTATCA-ACGCCCTGGTGTGATG 243753 ||| |||| || || | | || ||||| ||| Sbjct 1109509 GTCGGTGACTACCAGAAGGCC-GGTGTTATG 1109538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879293467500