Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3 111 2e-19 seq8 102 8e-17 >seq3 Length=2521181 Score = 111 bits (122), Expect = 2e-19 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673 ||||| || | || || | ||||| | || | ||| || || || ||||| ||| Sbjct 1109296 GAGGCTGTTGGAATTGAGCAAGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTGCTCGGC 1109355 Query 52674 ATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 52733 |||||||| || |||||| ||||||| ||||| || || || ||||| |||| Sbjct 1109356 ATGAACGCCAAGCTGATGTGCCAGTACATTGAGTTCGTCGCTGACCGTCTCCTGGTCGCT 1109415 Query 52734 CTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCG 52793 ||||| | | ||||||| |||| || ||| || || || || ||| | ||| || Sbjct 1109416 CTCGGTAACCAGAAGTACTACAACTCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCC 1109475 Query 52794 CTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || | |||||||||||||| ||||||||||| ||||| || || Sbjct 1109476 CTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 1109519 >seq8 Length=1820348 Score = 102 bits (112), Expect = 8e-17 Identities = 135/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| ||| || |||||||| || || || | ||| Sbjct 642766 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 642707 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | || ||||||||||| || || ||||| || ||||| || | || || || | ||| Sbjct 642706 TCAGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 642648 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 642647 -TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 642589 Query 138603 AAAA 138606 ||| Sbjct 642588 GAAA 642585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262089836000