Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq7 123 6e-23 seq8 107 5e-18 seq2 87.8 4e-12 >seq7 Length=2000612 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || ||||| ||||| |||||||| |||| |||||| || | | || Sbjct 1447262 CGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTG 1447321 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||||||||| || || ||||| |||||||| ||||| || ||| || Sbjct 1447322 CGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGGGGAATACCC 1447381 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||||||| |||| ||||| | | || || ||||| Sbjct 1447382 TCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATTGTGTCGGAGGACTCCACTTCCAAT 1447441 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | ||| || || || || || Sbjct 1447442 GTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTG 1447479 Score = 104 bits (114), Expect = 6e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| | ||| || || || || || |||| |||||||| | || || Sbjct 1447718 CGCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATATTGTAGTCGGACAGGGTA 1447777 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || ||||| ||||| ||||||||||||||||| ||||| ||| || || Sbjct 1447778 CGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGTTGGTCAGGAGGGATGCCC 1447837 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| ||| |||| |||||| | | || || || | Sbjct 1447838 TCCTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCGCTGGACTCAACCTCAAGG 1447897 Query 199589 GTGATCGTCTTACCCGT 199605 ||||| ||||| || || Sbjct 1447898 GTGATAGTCTTGCCGGT 1447914 >seq8 Length=1820348 Score = 107 bits (118), Expect = 5e-18 Identities = 172/247 (70%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 167768 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 167827 ||||||||||||| |||||||| ||||| ||| | |||||| | | ||| | | Sbjct 1046175 GCGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCGAGGATGGCATAC 1046116 Query 167828 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 167887 || || | ||||| || | ||| | | | | || || || || || | ||| ||| Sbjct 1046115 CACAGCTTCTGGGCCTTAATGGTGGAGCGGCCGCGGCCCTCCTTCTCATAACGCTCGTAG 1046056 Query 167888 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 167947 || | ||||| || | ||||| | || |||| ||||| || || || || || || Sbjct 1046055 AGAGCCTCGAACTCGTCGCCGTAGACATCAGCAAGGCCGGGGGCCTCGTTGGGGCAGAAT 1045996 Query 167948 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 168007 ||| |||| | ||||| || |||||| | ||||||||| || |||| ||||| | || Sbjct 1045995 AGAGTCCAGTCTCCATTGGACTCGACACGCTTCATGAACAGATCGGGGGTCCACAGGGCA 1045936 Query 168008 TAGAACA 168014 ||||||| Sbjct 1045935 TAGAACA 1045929 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| || ||| | ||||| || |||||||| || ||||||| Sbjct 642766 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 642707 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | || ||||| ||||| || || || || ||||| ||||| ||| ||| | Sbjct 642706 TCAGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 642647 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | || || || | || || ||||||||||| || || || || | Sbjct 642646 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 642587 Query 199620 AA 199621 || Sbjct 642586 AA 642585 >seq2 Length=3417088 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||||||||| |||| ||||||||| | | || | || || Sbjct 664636 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGACCGTCC 664695 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || |||||||| |||||||| ||||| || Sbjct 664696 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCAGG 664736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920844753350