Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09]
50 sequences; 33,998,198 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq7 123 6e-23
seq8 107 5e-18
seq2 87.8 4e-12
>seq7
Length=2000612
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || ||||| ||||| |||||||| |||| |||||| || | | ||
Sbjct 1447262 CGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTG 1447321
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||||||||||||||| || || ||||| |||||||| ||||| || ||| ||
Sbjct 1447322 CGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGGGGAATACCC 1447381
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||||||| |||| ||||| | | || || |||||
Sbjct 1447382 TCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATTGTGTCGGAGGACTCCACTTCCAAT 1447441
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || | ||| || || || || ||
Sbjct 1447442 GTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTG 1447479
Score = 104 bits (114), Expect = 6e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | |||||| | ||| || || || || || |||| |||||||| | || ||
Sbjct 1447718 CGCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATATTGTAGTCGGACAGGGTA 1447777
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || ||||| ||||| ||||||||||||||||| ||||| ||| || ||
Sbjct 1447778 CGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGTTGGTCAGGAGGGATGCCC 1447837
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| ||| ||| |||| |||||| | | || || || |
Sbjct 1447838 TCCTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCGCTGGACTCAACCTCAAGG 1447897
Query 199589 GTGATCGTCTTACCCGT 199605
||||| ||||| || ||
Sbjct 1447898 GTGATAGTCTTGCCGGT 1447914
>seq8
Length=1820348
Score = 107 bits (118), Expect = 5e-18
Identities = 172/247 (70%), Gaps = 0/247 (0%)
Strand=Plus/Minus
Query 167768 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 167827
||||||||||||| |||||||| ||||| ||| | |||||| | | ||| | |
Sbjct 1046175 GCGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCGAGGATGGCATAC 1046116
Query 167828 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 167887
|| || | ||||| || | ||| | | | | || || || || || | ||| |||
Sbjct 1046115 CACAGCTTCTGGGCCTTAATGGTGGAGCGGCCGCGGCCCTCCTTCTCATAACGCTCGTAG 1046056
Query 167888 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 167947
|| | ||||| || | ||||| | || |||| ||||| || || || || || ||
Sbjct 1046055 AGAGCCTCGAACTCGTCGCCGTAGACATCAGCAAGGCCGGGGGCCTCGTTGGGGCAGAAT 1045996
Query 167948 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 168007
||| |||| | ||||| || |||||| | ||||||||| || |||| ||||| | ||
Sbjct 1045995 AGAGTCCAGTCTCCATTGGACTCGACACGCTTCATGAACAGATCGGGGGTCCACAGGGCA 1045936
Query 168008 TAGAACA 168014
|||||||
Sbjct 1045935 TAGAACA 1045929
Score = 89.7 bits (98), Expect = 1e-12
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
|||| |||| ||||||||| || ||| | ||||| || |||||||| || |||||||
Sbjct 642766 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 642707
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| || ||||| ||||| || || || || ||||| ||||| ||| ||| |
Sbjct 642706 TCAGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 642647
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| |||||| | | || || || | || || ||||||||||| || || || || |
Sbjct 642646 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 642587
Query 199620 AA 199621
||
Sbjct 642586 AA 642585
>seq2
Length=3417088
Score = 87.8 bits (96), Expect = 4e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || ||||||||||| |||| ||||||||| | | || | || ||
Sbjct 664636 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGACCGTCC 664695
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
|| |||||||| || |||||||| |||||||| ||||| ||
Sbjct 664696 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCAGG 664736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178920844753350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |