Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09]
50 sequences; 33,998,198 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq3 248 9e-61
seq8 122 9e-23
seq7 118 1e-21
seq2 86.0 6e-12
>seq3
Length=2521181
Score = 248 bits (274), Expect = 9e-61
Identities = 561/827 (68%), Gaps = 21/827 (3%)
Strand=Plus/Minus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
||||| || || || || || || ||| ||| ||| | ||| || || |||||||||
Sbjct 1109504 TTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATGAAGTCGAAGGGGTTG 1109445
Query 132685 GCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741
|| | |||||||| ||| | | |||| || |||| || || | ||| || ||||||
Sbjct 1109444 GCAGAGTTGTAGTACTTCTGGTTACCGAG-AG--CGACCAGGAGACGGTCAGCGACGAAC 1109388
Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTT 132799
|| ||||| || |||| | || || | | | || |||||| |||| || || || |
Sbjct 1109387 TCAATGTACTGGCACATCAGCTTGGCGTTCATG-CCGAGCAGAGCGCAA-GGAAGAGCGT 1109330
Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859
| || || || |||||| || | || || || | ||| ||| || | |
Sbjct 1109329 CAGTCAGGAACTCTTGCTCAATTCCAACAGCCTCAACAATGATGTCCTGGACAACCTGCT 1109270
Query 132860 CGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919
||| || || | || || ||||| | ||| || ||||| |||| ||||
Sbjct 1109269 TGCTGGGGCGGTTGTTCAGGTGGGAGAACAGAAGGCAGGCGAAGTCAGTGTGCAGACCCT 1109210
Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGA 132979
| || | ||| ||||| ||||| ||| |||| ||||||||||| || || || ||||
Sbjct 1109209 CATCACGGGAGATGAGCTCGTTAGAGAAGGTCAGACCGGGCATGAGACCACGCTTCTTGA 1109150
Query 132980 GCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039
|||| || || | ||||||| ||| || ||||||| ||||||||||| ||||| || |
Sbjct 1109149 GCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCGACGGCAGCGAAGGCAA 1109090
Query 133040 CCAGGCGCTCGCCGAACGTGGCTTCTTTG-CTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098
| || || | || || | || | || | ||||||||| | ||||| ||||||
Sbjct 1109089 CGAGACGGGAAGCAAAGGTAGAATCACGGTCTTG-GATCCAGCGGATGGCCCAATCGGCC 1109031
Query 133099 TTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAG 133158
|| |||| ||| || || ||||| ||||| | || | | || | | | | |
Sbjct 1109030 TTGCGCTTGATGCAGGGAATGGTTTCAATGGCATCGAAGAG--GTAGGTGCGTTGCTTGG 1108973
Query 133159 GAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGG 133216
| | | |||||| ||||| || || || | || ||||| | ||||||||
Sbjct 1108972 GCTCCTTGATGTAGGTATCGATAAGAAGGGAGTAGGTCTCGGAGTGGATATTCTCCATCA 1108913
Query 133217 CGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGC 133275
|| || || || || ||||| || ||||| ||||| || || | || |||||||
Sbjct 1108912 TAATCTGGAAACCATAGAAGCAGCGAGCCTCAGTGACCTGGACCTCA-GCGCTGAAACGC 1108854
Query 133276 TCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG 133335
|| || || || || ||||| |||||||| ||||||||| || || || ||||| |
Sbjct 1108853 TCAACAAGGTTCTCATTGACAATGCCGTCAGAGGCGGCGAAGAAAGCAAGAACGTGAGAG 1108794
Query 133336 ATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC---CCAGTCGCGCGTGTCCTTGGACAGG 133392
| ||| | ||||| | ||||||| ||| | ||||||| | |||||||||||
Sbjct 1108793 ACGAAGTAACGCTCATCATCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGACAGA 1108734
Query 133393 TCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
|| | ||||||| ||||||| || || |||||||| || ||||||||
Sbjct 1108733 TCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACAT 1108687
>seq8
Length=1820348
Score = 122 bits (134), Expect = 9e-23
Identities = 139/183 (76%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || ||||| || ||||| ||| ||||||||||| | | ||||| | |
Sbjct 642586 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 642645
Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370
| |||| | |||| || |||| ||||| ||||| || ||| | ||||||||||| |
Sbjct 642646 GACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAACAGCGCC 642703
Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430
| || | ||| ||||| ||||| || || | ||||| || | ||||||||||||||| |
Sbjct 642704 TGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAGA 642763
Query 38431 AGG 38433
|||
Sbjct 642764 AGG 642766
>seq7
Length=2000612
Score = 118 bits (130), Expect = 1e-21
Identities = 159/218 (73%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || ||||| |||||||| | || || ||| || ||
Sbjct 1447482 ATGCAGATCTTCGTTAAGACTTTGACCGGCAAGACCATCACATTGGAAGTGGAGTCCTCC 1447423
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | |||| | |||| || |||| ||||| ||||| |||||| ||||||
Sbjct 1447422 GACACAATCGACAACG--TGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCCGACC 1447365
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| || || | || || || |||||||| || | |||||||| || ||||
Sbjct 1447364 AACAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACCCTTTCGGATTACA 1447305
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||| ||||| | || || || ||||||| |||
Sbjct 1447304 ACATCCAGAAGGAGTCCACTCTTCACCTGGTGCTCCGT 1447267
Score = 102 bits (112), Expect = 8e-17
Identities = 155/218 (71%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 38254 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGC 38313
|||| || || | || ||||| || |||||| | || || ||| ||| ||||| | |
Sbjct 1447928 TCGTCAAGACCTTGACCGGCAAGACTATCACCCTTGAGGTTGAGTCCAGCGACACCATCG 1447869
Query 38314 A-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| |||| | || || || | || || ||||| || || | ||||||||||| |||
Sbjct 1447868 ATAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAACAGCGTCTC 1447810
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | ||| || |||||||| || || | || ||||| ||||||||| ||||| ||
Sbjct 1447809 ATCTTCGCTGGAAAACAGCTTGAGGATGGCCGTACCCTGTCCGACTACAATATCCAGAAA 1447750
Query 38433 GAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||| | || || || ||||| |||||| || | || ||
Sbjct 1447749 GAATCTACCCTTCACTTGGTCCTGCGTCTGCGTGGTGG 1447712
Score = 100 bits (110), Expect = 3e-16
Identities = 155/218 (71%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || ||||| ||||| || ||||| | || || || | |
Sbjct 1447710 ATGCAGATCTTTGTTAAGACTCTCACCGGCAAGACTATCACTTTGGAGGTTGAATCATCA 1447651
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | || || | | |||| || |||| || || ||||| || ||| | ||||
Sbjct 1447650 GACACGATTGATAATG--TGAAGAGCAAGATCCAAGATAAGGAGGGTATCCCCCCTGACC 1447593
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
|||| || || |||| ||| ||||| || || || || | |||||||| ||||||||
Sbjct 1447592 AACAACGTCTAATTTTCGCCGGCAAGCAACTTGAAGATGGCCGCACCCTTTCCGACTACA 1447533
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||| ||||| | || |||| ||||| || |||
Sbjct 1447532 ACATCCAGAAGGAGTCTACATTGCACTTGGTTCTCCGT 1447495
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325
|||| ||||| |||||||| | || |||||| ||| ||| | | | | | ||
Sbjct 1448217 TCACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGATACTATCGACAATGTCAAGT 1448158
Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385
|| |||| ||||| || || || || | ||||||||||| || |||| ||| || |
Sbjct 1448157 CCAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAACAGCGTCTGATTTTCGCTGGAA 1448098
Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445
| ||| |||| || | |||||||| |||||| ||||| || |||||| | || || |
Sbjct 1448097 AGCAGTTGGAGGATGGCCGCACCCTTTCCGACTATAACATTCAGAAGGAATCCACCCTCC 1448038
Query 38446 ATTTGGTGCTGCG 38458
| |||| |||||
Sbjct 1448037 ACCTGGTCCTGCG 1448025
>seq2
Length=3417088
Score = 86.0 bits (94), Expect = 6e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| ||||| || ||| | ||||||||||| || || | ||| || || ||||| ||
Sbjct 664754 GACAAGGAGGGTATCCCCCCTGACCAACAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAG 664695
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446
|||| || |||||| |||||||||||||| ||||| |||| || ||
Sbjct 664694 GACGGTCGTACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTTCA 664645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172487392000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |