Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3 248 9e-61 seq8 122 9e-23 seq7 118 1e-21 seq2 86.0 6e-12 >seq3 Length=2521181 Score = 248 bits (274), Expect = 9e-61 Identities = 561/827 (68%), Gaps = 21/827 (3%) Strand=Plus/Minus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || ||| ||| ||| | ||| || || ||||||||| Sbjct 1109504 TTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATGAAGTCGAAGGGGTTG 1109445 Query 132685 GCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 || | |||||||| ||| | | |||| || |||| || || | ||| || |||||| Sbjct 1109444 GCAGAGTTGTAGTACTTCTGGTTACCGAG-AG--CGACCAGGAGACGGTCAGCGACGAAC 1109388 Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTT 132799 || ||||| || |||| | || || | | | || |||||| |||| || || || | Sbjct 1109387 TCAATGTACTGGCACATCAGCTTGGCGTTCATG-CCGAGCAGAGCGCAA-GGAAGAGCGT 1109330 Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859 | || || || |||||| || | || || || | ||| ||| || | | Sbjct 1109329 CAGTCAGGAACTCTTGCTCAATTCCAACAGCCTCAACAATGATGTCCTGGACAACCTGCT 1109270 Query 132860 CGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919 ||| || || | || || ||||| | ||| || ||||| |||| |||| Sbjct 1109269 TGCTGGGGCGGTTGTTCAGGTGGGAGAACAGAAGGCAGGCGAAGTCAGTGTGCAGACCCT 1109210 Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGA 132979 | || | ||| ||||| ||||| ||| |||| ||||||||||| || || || |||| Sbjct 1109209 CATCACGGGAGATGAGCTCGTTAGAGAAGGTCAGACCGGGCATGAGACCACGCTTCTTGA 1109150 Query 132980 GCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039 |||| || || | ||||||| ||| || ||||||| ||||||||||| ||||| || | Sbjct 1109149 GCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCGACGGCAGCGAAGGCAA 1109090 Query 133040 CCAGGCGCTCGCCGAACGTGGCTTCTTTG-CTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098 | || || | || || | || | || | ||||||||| | ||||| |||||| Sbjct 1109089 CGAGACGGGAAGCAAAGGTAGAATCACGGTCTTG-GATCCAGCGGATGGCCCAATCGGCC 1109031 Query 133099 TTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAG 133158 || |||| ||| || || ||||| ||||| | || | | || | | | | | Sbjct 1109030 TTGCGCTTGATGCAGGGAATGGTTTCAATGGCATCGAAGAG--GTAGGTGCGTTGCTTGG 1108973 Query 133159 GAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGG 133216 | | | |||||| ||||| || || || | || ||||| | |||||||| Sbjct 1108972 GCTCCTTGATGTAGGTATCGATAAGAAGGGAGTAGGTCTCGGAGTGGATATTCTCCATCA 1108913 Query 133217 CGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGC 133275 || || || || || ||||| || ||||| ||||| || || | || ||||||| Sbjct 1108912 TAATCTGGAAACCATAGAAGCAGCGAGCCTCAGTGACCTGGACCTCA-GCGCTGAAACGC 1108854 Query 133276 TCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG 133335 || || || || || ||||| |||||||| ||||||||| || || || ||||| | Sbjct 1108853 TCAACAAGGTTCTCATTGACAATGCCGTCAGAGGCGGCGAAGAAAGCAAGAACGTGAGAG 1108794 Query 133336 ATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC---CCAGTCGCGCGTGTCCTTGGACAGG 133392 | ||| | ||||| | ||||||| ||| | ||||||| | ||||||||||| Sbjct 1108793 ACGAAGTAACGCTCATCATCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGACAGA 1108734 Query 133393 TCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 || | ||||||| ||||||| || || |||||||| || |||||||| Sbjct 1108733 TCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACAT 1108687 >seq8 Length=1820348 Score = 122 bits (134), Expect = 9e-23 Identities = 139/183 (76%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || ||||| ||| ||||||||||| | | ||||| | | Sbjct 642586 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 642645 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | |||| | |||| || |||| ||||| ||||| || ||| | ||||||||||| | Sbjct 642646 GACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAACAGCGCC 642703 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| ||||| ||||| || || | ||||| || | ||||||||||||||| | Sbjct 642704 TGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAGA 642763 Query 38431 AGG 38433 ||| Sbjct 642764 AGG 642766 >seq7 Length=2000612 Score = 118 bits (130), Expect = 1e-21 Identities = 159/218 (73%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || ||||| |||||||| | || || ||| || || Sbjct 1447482 ATGCAGATCTTCGTTAAGACTTTGACCGGCAAGACCATCACATTGGAAGTGGAGTCCTCC 1447423 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| | |||| || |||| ||||| ||||| |||||| |||||| Sbjct 1447422 GACACAATCGACAACG--TGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCCGACC 1447365 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| || || | || || || |||||||| || | |||||||| || |||| Sbjct 1447364 AACAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACCCTTTCGGATTACA 1447305 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| ||||| | || || || ||||||| ||| Sbjct 1447304 ACATCCAGAAGGAGTCCACTCTTCACCTGGTGCTCCGT 1447267 Score = 102 bits (112), Expect = 8e-17 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 38254 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGC 38313 |||| || || | || ||||| || |||||| | || || ||| ||| ||||| | | Sbjct 1447928 TCGTCAAGACCTTGACCGGCAAGACTATCACCCTTGAGGTTGAGTCCAGCGACACCATCG 1447869 Query 38314 A-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | |||| | || || || | || || ||||| || || | ||||||||||| ||| Sbjct 1447868 ATAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAACAGCGTCTC 1447810 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| || |||||||| || || | || ||||| ||||||||| ||||| || Sbjct 1447809 ATCTTCGCTGGAAAACAGCTTGAGGATGGCCGTACCCTGTCCGACTACAATATCCAGAAA 1447750 Query 38433 GAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| | || || || ||||| |||||| || | || || Sbjct 1447749 GAATCTACCCTTCACTTGGTCCTGCGTCTGCGTGGTGG 1447712 Score = 100 bits (110), Expect = 3e-16 Identities = 155/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| || ||||| | || || || | | Sbjct 1447710 ATGCAGATCTTTGTTAAGACTCTCACCGGCAAGACTATCACTTTGGAGGTTGAATCATCA 1447651 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | || || | | |||| || |||| || || ||||| || ||| | |||| Sbjct 1447650 GACACGATTGATAATG--TGAAGAGCAAGATCCAAGATAAGGAGGGTATCCCCCCTGACC 1447593 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || || |||| ||| ||||| || || || || | |||||||| |||||||| Sbjct 1447592 AACAACGTCTAATTTTCGCCGGCAAGCAACTTGAAGATGGCCGCACCCTTTCCGACTACA 1447533 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| ||||| | || |||| ||||| || ||| Sbjct 1447532 ACATCCAGAAGGAGTCTACATTGCACTTGGTTCTCCGT 1447495 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325 |||| ||||| |||||||| | || |||||| ||| ||| | | | | | || Sbjct 1448217 TCACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGATACTATCGACAATGTCAAGT 1448158 Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || |||| ||||| || || || || | ||||||||||| || |||| ||| || | Sbjct 1448157 CCAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAACAGCGTCTGATTTTCGCTGGAA 1448098 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 | ||| |||| || | |||||||| |||||| ||||| || |||||| | || || | Sbjct 1448097 AGCAGTTGGAGGATGGCCGCACCCTTTCCGACTATAACATTCAGAAGGAATCCACCCTCC 1448038 Query 38446 ATTTGGTGCTGCG 38458 | |||| ||||| Sbjct 1448037 ACCTGGTCCTGCG 1448025 >seq2 Length=3417088 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || ||| | ||||||||||| || || | ||| || || ||||| || Sbjct 664754 GACAAGGAGGGTATCCCCCCTGACCAACAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAG 664695 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 |||| || |||||| |||||||||||||| ||||| |||| || || Sbjct 664694 GACGGTCGTACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTTCA 664645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172487392000