Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq8 226 4e-54 seq3 125 9e-24 seq2 109 7e-19 >seq8 Length=1820348 Score = 226 bits (250), Expect = 4e-54 Identities = 574/865 (66%), Gaps = 15/865 (2%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| || || | ||||| || || | ||||| || || || |||||||| | Sbjct 1045445 CCTCAGCACCTGCTGATGCGTGTTGCTGTTGGTATTCACGGAGAGGATATTGAGAAGGCC 1045504 Query 111672 TTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| || |||||| | ||| |||| ||||| | |||||||| || Sbjct 1045505 ATTGAGACCTACCACTTGATGTCTCAAAAGTAC-TTCACTCACGCTTCTCCAACCCTGTT 1045563 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||||||||||| || |||||| || || ||| ||||| ||| | |||||||| Sbjct 1045564 CAACGCTGGTACCCCCCAGCCCCAACTGGCCTCTTGCTTCCTGGTTGATATGAAGGAGGA 1045623 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || | || || |||| ||| | | |||||| ||||||||| ||||| Sbjct 1045624 CAGCATTGAGGGTATCTACGATACTTTGAAGACCTGTGCCATGATCTCAAAGACTGCTGG 1045683 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAA 111910 |||||| || || ||||||| | | || | ||| ||| | || || || Sbjct 1045684 TGGTATTGGTCTGAACATCCACCGCATTCGCGCGACTGGCTCTTACATTGGCGGAACTAA 1045743 Query 111911 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 111970 ||| || | |||||| | || ||||| ||||| | ||| |||||| |||||||| Sbjct 1045744 CGGTACCTCGAACGGTATTGTCCCCATGCTCCGCGTGTACAACAACACAGCCCGCTATGT 1045803 Query 111971 AAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024 |||| | ||| ||||| | || | | || |||| |||||||||||||| Sbjct 1045804 CGACCAGGGTGGAAACAAGCGTCCC---GGTGCCTTTGCCATCTACCTTGAGCCATGGCA 1045860 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 ||||||| || | |||||||| || | || ||||| ||| | ||||| || Sbjct 1045861 CGCGGATGTCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGTAAGGAGGAAATCCGTGC 1045920 Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144 ||| || || |||| || || |||| || ||||| ||||||||| | || ||| | Sbjct 1045921 CCGTGACCTGTTCTATGCCCTGTGGACCCCCGATCTGTTCATGAAGCGTGTCGAGTCCAA 1045980 Query 112145 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGA 112204 ||| | ||| |||| || || || || |||| ||||| || | |||| | || || Sbjct 1045981 TGGAGACTGGACTCTATTCTGCCCCAACGAGGCCCCCGGCCTTGCTGATGTCTACGGCGA 1046040 Query 112205 GGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCG-GGCGACTGCGACGGTGC 112263 ||||| || || |||||| || ||| | || | || ||| || | || | Sbjct 1046041 CGAGTTCGAGGCTCTCTACGAGCGTTATGAGAAGGAGGGCCGCGGCCGCT-CCACCAT-T 1046098 Query 112264 CAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAT 112322 || | || | ||||| | || || ||| || |||| ||||||||||||| || | Sbjct 1046099 AAGGCCCAGAAGCTGTGGTATGCCATCCTCGAGGCTCAGACCGAGACTGGTAACCCCTTC 1046158 Query 112323 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 112382 ||||| ||||| ||||| |||||| | ||||| || || ||||| ||||| ||| Sbjct 1046159 ATGCTCTACAAGGACGCTTGTAACAAGAAGAGCAACCAGAAGAACCTGGGTACCATCCGC 1046218 Query 112383 AGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 112442 || |||||||| || || || ||| | || | | | |||||| ||||| || Sbjct 1046219 AGCTCCAACCTGTGCACCGAGATCATCGAGTACAGTGCTCCTGATGAGGTCGCTGTCTGC 1046278 Query 112443 AACCTCGCATCAATCGCTCTCCCCA 112467 ||| | || || | || ||||||| Sbjct 1046279 AACTTGGCCTCCCTTGCCCTCCCCA 1046303 Score = 87.8 bits (96), Expect = 2e-12 Identities = 194/286 (68%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 176732 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 176791 |||||||||||||| |||||||| ||| ||| ||||| |||||||| | ||||| Sbjct 150634 AGACCCTTGATGTGACTACCGTCGTGATCTTGATCGGTCATAATCATGAGGTGGCCATAT 150575 Query 176792 CGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGA 176851 || ||| | || ||| ||||| ||||||||||| | | ||||||| Sbjct 150574 CGGAGCCCCTTGGTTTCCGTATACTCCTTCTTGTGTTGAAGACCAATAAAATTCTTGATG 150515 Query 176852 TCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACA-GAGGCATCACGAACATTCTTAC 176909 | ||||| ||| |||| | || ||| || | | || |||||||| || || Sbjct 150514 T-TTTGAATTTCTGCGTTTTTGGAGATCTG-GTCAAATGATGCATCACGTACGTTGAGCA 150457 Query 176910 ACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAA 176969 ||| |||||||||||||| ||||| | | || |||| || |||| |||| || | Sbjct 150456 GCTTTCCACGAAGAGGGAATACACCAAACAGGTCTGGACCGACAACAGCACGACCAGCCA 150397 Query 176970 CCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACA 177015 ||| || || || |||||||| || || | || || ||||| Sbjct 150396 TCGCCAGGCCCTTGGCGGAATCACCTTCAGTGAGAATCAGAGTACA 150351 >seq3 Length=2521181 Score = 125 bits (138), Expect = 9e-24 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 |||||||| || ||| | || || || || |||||||||||||||||||| || | Sbjct 1109072 CCTTTGCTTCCCGTCTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCTT 1109131 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 || | |||| | |||||||||||||| ||||||||||| ||||| |||||| |||| Sbjct 1109132 TCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCTAACG 1109191 Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||| ||||| ||||| ||||| || ||| Sbjct 1109192 AGCTCATCTCCCGTGATGAGGGTCTGCAC 1109220 >seq2 Length=3417088 Score = 109 bits (120), Expect = 7e-19 Identities = 168/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 16055 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 16114 |||||| | |||||||||||||||||||||| |||||| || ||||| ||||| Sbjct 1109225 CTTTCCAATAGCATCAATCTCATCAATGAAGATGATGCAAGGAGTATTTTTACGAGCATT 1109166 Query 16115 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG- 16173 | | || ||||| || |||||| || || |||||||| |||||||| || || | | Sbjct 1109165 TGCGAACAGATCACGGACACGCGAGGGACCAACACCAACGAACATCTCAACGAATTCGGA 1109106 Query 16174 -CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 16232 | | | ||| || | ||| || || ||||||||| || | || || ||||| Sbjct 1109105 ACCACTG-ACACTGTA-GAAAGGCACGCCAGATTCACCAGCGGTAGCCTTAGCAAGAAGG 1109048 Query 16233 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 |||||||| ||||| || || | ||| | ||||| || |||||||| || || Sbjct 1109047 GTCTTACCAGTACCAGGGGGTCCAGAGAGAATAGCACCACGGGGAATCTTAGCACC 1108992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742012036000