Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq8 176 5e-39 seq2 140 4e-28 seq3 95.1 1e-14 >seq8 Length=1820348 Score = 176 bits (194), Expect = 5e-39 Identities = 550/846 (65%), Gaps = 7/846 (1%) Strand=Plus/Minus Query 110279 TGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCA 110338 ||||||| |||| || || | ||||| |||| ||| || | |||| || | Sbjct 1046303 TGGGGAGGGCAAGGGAGGCCAAGTTGCAGACAGCGACCTCATCAGGAGCACTGTACTCGA 1046244 Query 110339 AAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGG 110398 || || || |||| |||||| || ||| ||||| ||||||||| || || Sbjct 1046243 TGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCT 1046184 Query 110399 AGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAA 110458 ||| || || ||||| ||||||||| | ||| ||||||| || ||||| | || ||| | Sbjct 1046183 TGTTACAAGCGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCGAGGA 1046124 Query 110459 TGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTAC 110517 |||| | ||| | | || | ||| | || | | || | || |||| ||| || Sbjct 1046123 TGGCATACCACAGCTTCTG-GGCCTTAATGGTGGAGCGGCCGCGGCCCTCCTTCTCATAA 1046065 Query 110518 TTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCG 110577 ||| | |||| || || | ||||| ||||||| ||| || |||| || | Sbjct 1046064 CGCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCAAGGCCGGGGGCCTCGTTG 1046005 Query 110578 GGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATC 110637 || ||||| || | ||| | |||| ||| || | |||||||||||| || || || Sbjct 1046004 GGGCAGAATAGAGTCCAGTCTCCATTGGACTCGACACGCTTCATGAACAGATCGGGGGTC 1045945 Query 110638 CACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGC 110697 |||| || |||| ||||||||| ||| || || | ||| ||||| ||| || Sbjct 1045944 CACAGGGCATAGAACAGGTCACGGGCACGGATTTCCTCCTTACCGTGGTTCTTGCGGAGG 1045885 Query 110698 TCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTA 110757 || | || || | || ||||| ||||||||| || || |||| || | || || | Sbjct 1045884 TCGAGGAACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACCGGGA 1045825 Query 110758 CG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGA 110814 || || |||||| |||||||| |||||| ||| | || | |||||| || Sbjct 1045824 CGCTTGTTTCCACCCTGGTCGACATAGCGGGCTGTGTTGTTGTACACGCGGAGCATGGGG 1045765 Query 110815 ATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCG 110874 | ||| || | || ||| || || || | ||| || | | || |||||| | Sbjct 1045764 ACAATACCGTTCGAGGTACCGTTAGTTCCGCCAATGTAAGAGCCAGTCGCGCGAATGCGG 1045705 Query 110875 TGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGT 110933 ||||| | || |||||||||||| || ||| || ||||| ||| | | || Sbjct 1045704 TGGATGTTCAGACCAATACCACCAGCAGTCTTTGAGATCATGGCACAGGTCT-TCAAAGT 1045646 Query 110934 ACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTG 110993 | | || ||||| ||||| || |||| | ||| || |||||||| | || || Sbjct 1045645 ATCGTAGATACCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAGGCCAGTTG 1045586 Query 110994 AGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGA 111053 || | || || || || ||||| || || || | || ||| |||| ||| || Sbjct 1045585 GGGCTGGGGGGTACCAGCGTTGAACAGGGTTGGAGAAGCGTGAGTGAAGTACTTTTGAGA 1045526 Query 111054 CATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAAC 111113 |||| || ||| || || | || | ||| | ||||||||||||| ||||| Sbjct 1045525 CATCAAGTGGTAGGTCTCAATGGCCTTCTCAATATCCTCTCCGTGAATACCAACAGCAAC 1045466 Query 111114 TCGCAT 111119 ||||| Sbjct 1045465 ACGCAT 1045460 >seq2 Length=3417088 Score = 140 bits (154), Expect = 4e-28 Identities = 305/447 (68%), Gaps = 15/447 (3%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 |||||||||||||| || || | || || | || |||| |||| ||||| ||| || Sbjct 1109398 CGATCGAAACGACCAGGACGCATAAGGGCTTTGTCCAGAACATCGGGTCGGTTGGTACCG 1109339 Query 11563 GCAATGACTACAATGCCAGTCTCATTG---TCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 || | || || | | || ||| | | ||| || |||||||| || || | || Sbjct 1109338 GCGAGAACGACGA--CTTGT-TCAGAGGTATTGAAGCCATCCATTTCGGTCAGGATTTGA 1109282 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGG-GCATACCACCTGCC--GAACGCTTCTTA 11676 |||| || ||||||||||||||| | || | ||| | || ||| Sbjct 1109281 TTGAGAGTGCTCTCACGCTCATCGTTGCCGCCGCCGAAGTTTTGCTTGGCTCGAGACTTT 1109222 Query 11677 CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCG 11736 || | ||| ||||||||||| ||||| | ||| || || || ||| || | | || Sbjct 1109221 CCAATAGCATCAATCTCATCAATGAAGATGATGCAAGGAGTATTTTTACGAGCATTTGCG 1109162 Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCA 11796 || || ||||| |||||| | |||||||| ||||||||||||||||| | | || Sbjct 1109161 AACAGATCACGGACACGCGAGGGACCAACACCAACGAACATCTCAACGAATTCGGAACCA 1109102 Query 11797 -GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855 |||||| | ||| || || ||| ||||||||| | || ||| || || ||||| Sbjct 1109101 CTGACACTGTA-GAAAGGCACGCCAGATTCACCAGCGGTAGCCTTAGCAAGAAGGGTCTT 1109043 Query 11856 ACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTCCA 11913 ||| |||||||| | |||| ||||| || |||||||| ||||| ||||| |||| Sbjct 1109042 ACCAGTACCAGGGGGTCCAGAGAGAATAGCACCACGGGGAATCTTAGCACCGAGCTTC-- 1108985 Query 11914 AAGTAGCGCTCAGGCTTCTTGAGGAAG 11940 | | ||||| |||| || |||||| Sbjct 1108984 TGGAATCGCTCCGGCTGCTGCAGGAAG 1108958 >seq3 Length=2521181 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/233 (70%), Gaps = 9/233 (4%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || ||||| || ||||||||||| ||| |||| || || |||||||| || Sbjct 1109219 TGCAGACCCTCATCACGGGAGATGAGCTCGTTAGAGAAGGTCAGACCGGGCATGAGACCA 1109160 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||| | ||| ||||| |||||||| ||||| || Sbjct 1109159 CGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCGACGGCA 1109100 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA------GACTTGTCGAACCACTTGAGA 119681 ||||| || | ||||| ||| |||||| || | |||| || ||| || Sbjct 1109099 GCGAAGGCAACGAGACGGGAAGC-AAAGGTAGAATCACGGTCTTG--GATCCAGCGGATG 1109043 Query 119682 GCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734 ||||| | |||||| |||| |||||||| | |||| ||||| ||||| || Sbjct 1109042 GCCCAATCGGCCTTGCGCTTGATGCAGGGAATGGTTTCAATGGCATCGAAGAG 1108990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975631890000