Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq8 248 1e-60 seq3 114 2e-20 seq2 87.8 2e-12 >seq8 Length=1820348 Score = 248 bits (274), Expect = 1e-60 Identities = 576/859 (67%), Gaps = 21/859 (2%) Strand=Plus/Minus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 || ||||| | || ||||| ||||| ||||| |||||| | | ||||||| | Sbjct 1046301 GGGAGGGCAAGGGAGGCCAAGTTGCAGACAGCGACCTCATCAGGAGCACTGTACTCGATG 1046242 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || |||| |||||| || || || |||| ||||| ||||| ||||| ||| Sbjct 1046241 ATCTCGGTGCACAGGTTGGAGCTGCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCTTG 1046182 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 || || || ||||||||||||||| |||| | || ||||| ||||| | || ||| || Sbjct 1046181 TTACAAGCGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCGAGGATG 1046122 Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCG--TTGGCC-CGTCCCTCCGCCTCGTA 106692 || | ||||| | || | | || ||||| | |||| || |||||| ||| || Sbjct 1046121 GCATACCACAGCTTCTGGGCCT----TAATGGTGGAGCGGCCGCGGCCCTCCTTCTCATA 1046066 Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 106752 |||||| || || ||||| || || | || | || || || |||| || Sbjct 1046065 ACGCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCAAGGCCGGGGGCCTCGTT 1046006 Query 106753 TGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 106812 || ||||| |||| ||| | ||| ||| || ||||||||||| || || || | Sbjct 1046005 GGGGCAGAATAGAGTCCAGTCTCCATTGGACTCGACACGCTTCATGAACAGATCGGGGGT 1045946 Query 106813 CCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 106871 |||||||| | || || || | ||| || || || | ||| ||||| || | Sbjct 1045945 CCACAGGGCATAGAACAGGTCACGGGCACGGA-TTTCCTCCTTACCGTGGTTCTTGCGGA 1045887 Query 106872 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCT 106931 || |||||||| | || ||||||||||||||||||||| |||| || | | || Sbjct 1045886 GGTCGAGGAACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACC-- 1045829 Query 106932 TTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 106985 ||||| ||| | || | |||||||| |||||| ||| | ||||| |||| Sbjct 1045828 -GGGACGCTTGTTTCCACCCTGGTCGACATAGCGGGCTGTGTTGTTGTACACGCGGAGCA 1045770 Query 106986 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 107045 | || | |||||| | || ||| || || || | ||| ||| | | || | | Sbjct 1045769 TGGGGACAATACCGTTCGAGGTACCGTTAGTTCCGCCAATGTAAGAGCCAGTCGCGCGAA 1045710 Query 107046 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 107105 ||||||| || |||||||| ||||| ||||||||| ||||| | | | Sbjct 1045709 TGCGGTGGATGTTCAGACCAATACCACCAGCAGTCTTTGAGATCATGGCACAGGTCTTCA 1045650 Query 107106 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 107165 ||| | |||||||| | || ||||||||| | | | ||||||||| || || Sbjct 1045649 AAGTATCGTAGATACCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAGGCCA 1045590 Query 107166 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC-CT 107224 || || || |||||||| ||||| |||||||| | |||||| |||| ||| | Sbjct 1045589 GTTGGGGCTGGGGGGTACCAGCGTTGAACAGGGTTGGAGAAGCGTGAGTGAA-GTACTTT 1045531 Query 107225 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATG 107284 || |||||| || ||| ||||| | | | ||||| || || ||||| || || | Sbjct 1045530 TGAGACATCAAGTGGTAGGTCTCAATGGCCTTCTCAATATCCTCTCCGTGAATACCAACA 1045471 Query 107285 GCCACACGCATAAACATGT 107303 || |||||||| | || || Sbjct 1045470 GCAACACGCATCAGCAGGT 1045452 >seq3 Length=2521181 Score = 114 bits (126), Expect = 2e-20 Identities = 277/417 (66%), Gaps = 2/417 (0%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| || || |||||||| |||||||||||||| ||| | ||| ||| ||||| Sbjct 1109519 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATG 1109460 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAA-ATGGGTGGCACCCCAACTTGTTTGAGGAGACG 117104 ||||| || || || | ||| | | ||| || | | |||||||| Sbjct 1109459 AAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTGGTTACCGAGAGCGACC-AGGAGACG 1109401 Query 117105 ATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTACA 117164 || | || |||||||||||| | ||||| || | |||||| |||| ||| || Sbjct 1109400 GTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGCGTTCATGCCGAGCAGAGCGCA 1109341 Query 117165 TGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTG 117224 || || ||||| | |||| ||| |||||| |||| ||||| | |||| | || Sbjct 1109340 AGGAAGAGCGTCAGTCAGGAACTCTTGCTCAATTCCAACAGCCTCAACAATGATGTCCTG 1109281 Query 117225 GATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCCTG 117284 || | | | |||| | || || ||| || ||| || || Sbjct 1109280 GACAACCTGCTTGCTGGGGCGGTTGTTCAGGTGGGAGAACAGAAGGCAGGCGAAGTCAGT 1109221 Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| ||||||||||| ||||| || || || || |||||| || || ||||||||||| Sbjct 1109220 GTGCAGACCCTCATCACGGGAGATGAGCTCGTTAGAGAAGGTCAGACCGGGCATGAGACC 1109161 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCAC 117401 |||||||| | ||| | |||| | ||| || || ||||||||||||||||| || Sbjct 1109160 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCGAC 1109104 >seq2 Length=3417088 Score = 87.8 bits (96), Expect = 2e-12 Identities = 163/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 9362 CTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGAT 9421 |||||| | |||||||||||||||||||||| || || || ||||| || || | Sbjct 1109225 CTTTCCAATAGCATCAATCTCATCAATGAAGATGATGCAAGGAGTATTTTTACGAGCATT 1109166 Query 9422 TTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG- 9480 | | || ||||| || || | || || |||||||| |||||||| || || | | Sbjct 1109165 TGCGAACAGATCACGGACACGCGAGGGACCAACACCAACGAACATCTCAACGAATTCGGA 1109106 Query 9481 -CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9539 | | | ||| || | ||| || || ||||||||| || | || || ||||| Sbjct 1109105 ACCACTG-ACACTGTA-GAAAGGCACGCCAGATTCACCAGCGGTAGCCTTAGCAAGAAGG 1109048 Query 9540 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 |||||||| ||||| || || | ||| | ||||| || |||||||| || || Sbjct 1109047 GTCTTACCAGTACCAGGGGGTCCAGAGAGAATAGCACCACGGGGAATCTTAGCACC 1108992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980431262000