Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09]
50 sequences; 33,998,198 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq7 156 9e-33
seq8 109 1e-18
seq2 89.7 1e-12
>seq7
Length=2000612
Score = 156 bits (172), Expect = 9e-33
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||||||||||||||| || || || |||||||| | ||| || | ||||||||
Sbjct 1447274 ACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCTTCC 1447333
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| || |||||||| || |||||||| || ||||| || || ||||| ||
Sbjct 1447334 AGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGG 1447393
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| ||||| || || ||||| || |||||||| | || | |||||
Sbjct 1447394 ATCTTGCTCTTCACGTTGTCGATTGTGTCGGAGGACTCCACTTCCAATGTGATGGTCTTG 1447453
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||||||| || ||||| | |||||
Sbjct 1447454 CCGGTCAAAGTCTTAACGAAGATCTGCAT 1447482
Score = 104 bits (114), Expect = 5e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| | ||| | || ||||| || || || ||||| |||| ||| || | ||||||||
Sbjct 1447501 AACCAAGTGCAATGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTC 1447560
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
|| ||||| || ||||| || || ||||||||||| || || || || || || |||||
Sbjct 1447561 AAGTTGCTTGCCGGCGAAAATTAGACGTTGTTGGTCAGGGGGGATACCCTCCTTATCTTG 1447620
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || ||| || || ||||| ||||| || ||| || || | || | |||||
Sbjct 1447621 GATCTTGCTCTTCACATTATCAATCGTGTCTGATGATTCAACCTCCAAAGTGATAGTCTT 1447680
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | ||| || || || | |||||
Sbjct 1447681 GCCGGTGAGAGTCTTAACAAAGATCTGCAT 1447710
>seq8
Length=1820348
Score = 109 bits (120), Expect = 1e-18
Identities = 134/182 (74%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| || || ||||| ||| ||||| | ||||| ||||||||||| || ||||||||
Sbjct 642764 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 642705
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || |||||||| || || || || || ||||| || || || ||||||||| ||
Sbjct 642704 AGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 642645
Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129
|||||||| ||| || || || ||||||| ||||| || |||| || || |||
Sbjct 642644 ATGGTGTCGCTCGA---CTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 642588
Query 195130 AA 195131
||
Sbjct 642587 AA 642586
Score = 102 bits (112), Expect = 2e-16
Identities = 189/276 (68%), Gaps = 6/276 (2%)
Strand=Plus/Plus
Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648
||||| ||| | ||||| ||||||| ||||||||| | || | |||||| || |||
Sbjct 1045931 TTCTATGCCCTGTGGACCCCCGATCTGTTCATGAAGCGTGTCGAGTCCAATGGAGACTGG 1045990
Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708
| || ||||| ||||| || || || || |||| |||||| || || ||||||||||
Sbjct 1045991 ACTCTATTCTGCCCCAACGAGGCCCCCGGCCTTGCTGATGTCTACGGCGACGAGTTCGAG 1046050
Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGAA 160768
|||| || || | || || || ||||| | | | | | |||||||| |
Sbjct 1046051 GCTCTCTACGAGCGTTATGAGAAGGAGGGCCGCGGCCGCTCCACCATTAAGGCCCAGAAG 1046110
Query 160769 CTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAG 160828
|||||| || |||||| | || || |||| |||| ||||| || ||||||
Sbjct 1046111 CTGTGGTATGCCATCCTCGAGGCTCAGACCGAGACTGGTAACCCCTTCATGCTCTACAAG 1046170
Query 160829 GATGCCATCTGTCGCAAGA---GTAACCAGAAGAAC 160861
|| || ||| ||||| | ||||||||||||
Sbjct 1046171 GACGCT---TGTAACAAGAAGAGCAACCAGAAGAAC 1046203
>seq2
Length=3417088
Score = 89.7 bits (98), Expect = 1e-12
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| |||||||| || ||||| || || || ||||| || | || || | || || |||
Sbjct 664639 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGACCGTCCTCG 664698
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
||||||||||| |||||||| || || |||||||| || || || || || ||||||
Sbjct 664699 AGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCT 664755
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109480889238350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |