Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq7 156 9e-33 seq8 109 1e-18 seq2 89.7 1e-12 >seq7 Length=2000612 Score = 156 bits (172), Expect = 9e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||||||||||||||| || || || |||||||| | ||| || | |||||||| Sbjct 1447274 ACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCTTCC 1447333 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || |||||||| || |||||||| || ||||| || || ||||| || Sbjct 1447334 AGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGG 1447393 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || || ||||| || |||||||| | || | ||||| Sbjct 1447394 ATCTTGCTCTTCACGTTGTCGATTGTGTCGGAGGACTCCACTTCCAATGTGATGGTCTTG 1447453 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||||||| || ||||| | ||||| Sbjct 1447454 CCGGTCAAAGTCTTAACGAAGATCTGCAT 1447482 Score = 104 bits (114), Expect = 5e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| | || ||||| || || || ||||| |||| ||| || | |||||||| Sbjct 1447501 AACCAAGTGCAATGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTC 1447560 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || ||||| || || ||||||||||| || || || || || || ||||| Sbjct 1447561 AAGTTGCTTGCCGGCGAAAATTAGACGTTGTTGGTCAGGGGGGATACCCTCCTTATCTTG 1447620 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| || || ||||| ||||| || ||| || || | || | ||||| Sbjct 1447621 GATCTTGCTCTTCACATTATCAATCGTGTCTGATGATTCAACCTCCAAAGTGATAGTCTT 1447680 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || || || | ||||| Sbjct 1447681 GCCGGTGAGAGTCTTAACAAAGATCTGCAT 1447710 >seq8 Length=1820348 Score = 109 bits (120), Expect = 1e-18 Identities = 134/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| ||| ||||| | ||||| ||||||||||| || |||||||| Sbjct 642764 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 642705 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || |||||||| || || || || || ||||| || || || ||||||||| || Sbjct 642704 AGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 642645 Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 |||||||| ||| || || || ||||||| ||||| || |||| || || ||| Sbjct 642644 ATGGTGTCGCTCGA---CTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 642588 Query 195130 AA 195131 || Sbjct 642587 AA 642586 Score = 102 bits (112), Expect = 2e-16 Identities = 189/276 (68%), Gaps = 6/276 (2%) Strand=Plus/Plus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 ||||| ||| | ||||| ||||||| ||||||||| | || | |||||| || ||| Sbjct 1045931 TTCTATGCCCTGTGGACCCCCGATCTGTTCATGAAGCGTGTCGAGTCCAATGGAGACTGG 1045990 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 | || ||||| ||||| || || || || |||| |||||| || || |||||||||| Sbjct 1045991 ACTCTATTCTGCCCCAACGAGGCCCCCGGCCTTGCTGATGTCTACGGCGACGAGTTCGAG 1046050 Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGAA 160768 |||| || || | || || || ||||| | | | | | |||||||| | Sbjct 1046051 GCTCTCTACGAGCGTTATGAGAAGGAGGGCCGCGGCCGCTCCACCATTAAGGCCCAGAAG 1046110 Query 160769 CTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAG 160828 |||||| || |||||| | || || |||| |||| ||||| || |||||| Sbjct 1046111 CTGTGGTATGCCATCCTCGAGGCTCAGACCGAGACTGGTAACCCCTTCATGCTCTACAAG 1046170 Query 160829 GATGCCATCTGTCGCAAGA---GTAACCAGAAGAAC 160861 || || ||| ||||| | |||||||||||| Sbjct 1046171 GACGCT---TGTAACAAGAAGAGCAACCAGAAGAAC 1046203 >seq2 Length=3417088 Score = 89.7 bits (98), Expect = 1e-12 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || || || ||||| || | || || | || || ||| Sbjct 664639 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGACCGTCCTCG 664698 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 ||||||||||| |||||||| || || |||||||| || || || || || |||||| Sbjct 664699 AGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCT 664755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109480889238350