Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09]
50 sequences; 33,998,198 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq8 138 1e-26
seq3 131 2e-24
seq15 129 7e-24
seq11 123 3e-22
seq6 102 1e-15
>seq8
Length=1820348
Score = 138 bits (152), Expect = 1e-26
Identities = 280/422 (66%), Gaps = 2/422 (0%)
Strand=Plus/Minus
Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCG-TCGTACCCAGGTTCTGCTGGTTG 1628220
||| || |||||||||||||||||||| | | | | ||||||||||||| |||||||
Sbjct 1046249 ACTCGATGATCTCGGTGCACAGGTTGGA-GCTGCGGATGGTACCCAGGTTCTTCTGGTTG 1046191
Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280
| || ||| |||||||||| ||||||| |||| || |||||| |||| |||
Sbjct 1046190 CTCTTCTTGTTACAAGCGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCC 1046131
Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCTNNNNN 1628340
||| |||||| |||| | || | || | | | || |||||||||
Sbjct 1046130 TCGAGGATGGCATACCACAGCTTCTGGGCCTTAATGGTGGAGCGGCCGCGGCCCTCCTTC 1046071
Query 1628341 NNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCC 1628400
|| || | |||||||| || |||||||| |||
Sbjct 1046070 TCATAACGCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCAAGGCCGGGGGCC 1046011
Query 1628401 TCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCA 1628460
||| || || || || | |||||| ||| || | | | || ||| || || ||
Sbjct 1046010 TCGTTGGGGCAGAATAGAGTCCAGTCTCCATTGGACTCGACACGCTTCATGAACAGATCG 1045951
Query 1628461 CACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTT 1628520
|||||||| || || || ||||| || || ||| | |||||||| |||||||||||
Sbjct 1045950 GGGGTCCACAGGGCATAGAACAGGTCACGGGCACGGATTTCCTCCTTACCGTGGTTCTTG 1045891
Query 1628521 TTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCG 1628580
||||||||| | |||| | || |||||||| ||||| |||||| |||||||||
Sbjct 1045890 CGGAGGTCGAGGAACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCA 1045831
Query 1628581 CC 1628582
||
Sbjct 1045830 CC 1045829
>seq3
Length=2521181
Score = 131 bits (144), Expect = 2e-24
Identities = 184/255 (72%), Gaps = 5/255 (2%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| | || |||||
Sbjct 1109528 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATG 1109469
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
||||||| | ||| ||||||| | ||||||| ||| | | ||||| | |
Sbjct 1109468 GACTCCATGAAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTGGTTACCGAGAGCGACC 1109409
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA-- 868868
|| || ||||| ||||| ||||| |||||||||||||| || ||||||||||||||
Sbjct 1109408 AGGAGACGGTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGCGTTCATGCCGAGC 1109349
Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928
|||||| | || || | || ||| ||||||| ||| || | || ||||| || |
Sbjct 1109348 AGAGCGCAA--GGAAGAGCGTCAGTCAGGAACTCTTGCTCAATTCCAACAGCCTCAACAA 1109291
Query 868929 TGATCTGCCTGGGCA 868943
|||| | ||||| ||
Sbjct 1109290 TGATGT-CCTGGACA 1109277
Score = 104 bits (114), Expect = 3e-16
Identities = 180/256 (70%), Gaps = 7/256 (3%)
Strand=Plus/Minus
Query 869210 AAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCC 869269
|||| || ||||||||||| || |||||||||||||| ||||| | | |||| |||
Sbjct 1109183 AAGGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCA 1109124
Query 869270 GAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGG 869329
||||| ||||| ||||||||||| || ||| | | ||| || |||||| || ||
Sbjct 1109123 GAGAAGAAGATACCCTCGACGGCAGCGAAGGCAACGAGACGGGAAGCAAAG--GTAGAAT 1109066
Query 869330 C-CCTCCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGT 869388
| | |||| |||||| || ||||| |||||||| | | | | || | ||
Sbjct 1109065 CACGGTCTTG--GATCCAGCGGATGGCCCAATCGGCCTTGCGCTTGATGCAGGGAATGGT 1109008
Query 869389 GTCGATGGCGCGAAAGAGGT-GGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCA 869447
|| ||||| ||||||| ||| | || | || ||||||| ||||| ||||| |
Sbjct 1109007 TTCAATGGCATCGAAGAGGTAGGTGCGTTGC-TTGGGCTCCTTGATGTAGGTATCGATAA 1108949
Query 869448 GGAGCGAATAGGTCTC 869463
| || || ||||||||
Sbjct 1108948 GAAGGGAGTAGGTCTC 1108933
>seq15
Length=621388
Score = 129 bits (142), Expect = 7e-24
Identities = 95/111 (86%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|||||||| ||||||||||||||| |||| |||||| | || |||||| | || || |||
Sbjct 583869 GCCGCCAATTACCTCGACATCAAGGCTCTTCTCGATGTCGGCTGCAAGACCGTCGCTAAC 583928
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296
|||||||| |||||||| || |||||||| ||||||||||| |||||| ||
Sbjct 583929 ATGATCAAAGGCAAGTCCCCTGAGGAGATTCGCAAGACCTTCAACATCCAG 583979
>seq11
Length=1394339
Score = 123 bits (136), Expect = 3e-22
Identities = 92/108 (85%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|||||||||||||| || |||||| |||| | ||| |||| |||||| |||| || ||
Sbjct 341728 GCCGCCAACTACCTTGATATCAAGGCTCTCTTGGATGTTGGATGCAAGACTGTCGCAAAT 341669
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293
||||||||||||||||| |||||||||||||| ||||| || ||||||
Sbjct 341668 ATGATCAAGGGCAAGTCCCCCGAGGAGATCCGTAAGACATTCAACATC 341621
>seq6
Length=2103670
Score = 102 bits (112), Expect = 1e-15
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
||||||||||| ||||| || || ||||| |||||||| || | |||||||| |||
Sbjct 1552971 GACAGCATCGGTGGCACCGTAACCTGCGTAATCCGCAACGTCCCTGTCGGCCTCGGTGAG 1552912
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| ||||| || || | || || |||| |||||||||||| ||||| ||||||
Sbjct 1552911 CCCTGCTTCGATAAACTTGAAGCAAAACTCGGCCACGCCATGCTCAGCATCCCCGCCACC 1552852
Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT 19192
||||| ||||| || ||| ||| ||
Sbjct 1552851 AAGGGCTTCGAAATCGGCTCCGGCTT 1552826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107135096765850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |