Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq8 138 1e-26 seq3 131 2e-24 seq15 129 7e-24 seq11 123 3e-22 seq6 102 1e-15 >seq8 Length=1820348 Score = 138 bits (152), Expect = 1e-26 Identities = 280/422 (66%), Gaps = 2/422 (0%) Strand=Plus/Minus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCG-TCGTACCCAGGTTCTGCTGGTTG 1628220 ||| || |||||||||||||||||||| | | | | ||||||||||||| ||||||| Sbjct 1046249 ACTCGATGATCTCGGTGCACAGGTTGGA-GCTGCGGATGGTACCCAGGTTCTTCTGGTTG 1046191 Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280 | || ||| |||||||||| ||||||| |||| || |||||| |||| ||| Sbjct 1046190 CTCTTCTTGTTACAAGCGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCC 1046131 Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCTNNNNN 1628340 ||| |||||| |||| | || | || | | | || ||||||||| Sbjct 1046130 TCGAGGATGGCATACCACAGCTTCTGGGCCTTAATGGTGGAGCGGCCGCGGCCCTCCTTC 1046071 Query 1628341 NNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCC 1628400 || || | |||||||| || |||||||| ||| Sbjct 1046070 TCATAACGCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCAAGGCCGGGGGCC 1046011 Query 1628401 TCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCA 1628460 ||| || || || || | |||||| ||| || | | | || ||| || || || Sbjct 1046010 TCGTTGGGGCAGAATAGAGTCCAGTCTCCATTGGACTCGACACGCTTCATGAACAGATCG 1045951 Query 1628461 CACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTT 1628520 |||||||| || || || ||||| || || ||| | |||||||| ||||||||||| Sbjct 1045950 GGGGTCCACAGGGCATAGAACAGGTCACGGGCACGGATTTCCTCCTTACCGTGGTTCTTG 1045891 Query 1628521 TTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCG 1628580 ||||||||| | |||| | || |||||||| ||||| |||||| ||||||||| Sbjct 1045890 CGGAGGTCGAGGAACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCA 1045831 Query 1628581 CC 1628582 || Sbjct 1045830 CC 1045829 >seq3 Length=2521181 Score = 131 bits (144), Expect = 2e-24 Identities = 184/255 (72%), Gaps = 5/255 (2%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || ||||| Sbjct 1109528 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATG 1109469 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | Sbjct 1109468 GACTCCATGAAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTGGTTACCGAGAGCGACC 1109409 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA-- 868868 || || ||||| ||||| ||||| |||||||||||||| || |||||||||||||| Sbjct 1109408 AGGAGACGGTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGCGTTCATGCCGAGC 1109349 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 |||||| | || || | || ||| ||||||| ||| || | || ||||| || | Sbjct 1109348 AGAGCGCAA--GGAAGAGCGTCAGTCAGGAACTCTTGCTCAATTCCAACAGCCTCAACAA 1109291 Query 868929 TGATCTGCCTGGGCA 868943 |||| | ||||| || Sbjct 1109290 TGATGT-CCTGGACA 1109277 Score = 104 bits (114), Expect = 3e-16 Identities = 180/256 (70%), Gaps = 7/256 (3%) Strand=Plus/Minus Query 869210 AAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCC 869269 |||| || ||||||||||| || |||||||||||||| ||||| | | |||| ||| Sbjct 1109183 AAGGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCA 1109124 Query 869270 GAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGG 869329 ||||| ||||| ||||||||||| || ||| | | ||| || |||||| || || Sbjct 1109123 GAGAAGAAGATACCCTCGACGGCAGCGAAGGCAACGAGACGGGAAGCAAAG--GTAGAAT 1109066 Query 869330 C-CCTCCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGT 869388 | | |||| |||||| || ||||| |||||||| | | | | || | || Sbjct 1109065 CACGGTCTTG--GATCCAGCGGATGGCCCAATCGGCCTTGCGCTTGATGCAGGGAATGGT 1109008 Query 869389 GTCGATGGCGCGAAAGAGGT-GGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCA 869447 || ||||| ||||||| ||| | || | || ||||||| ||||| ||||| | Sbjct 1109007 TTCAATGGCATCGAAGAGGTAGGTGCGTTGC-TTGGGCTCCTTGATGTAGGTATCGATAA 1108949 Query 869448 GGAGCGAATAGGTCTC 869463 | || || |||||||| Sbjct 1108948 GAAGGGAGTAGGTCTC 1108933 >seq15 Length=621388 Score = 129 bits (142), Expect = 7e-24 Identities = 95/111 (86%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||| ||||||||||||||| |||| |||||| | || |||||| | || || ||| Sbjct 583869 GCCGCCAATTACCTCGACATCAAGGCTCTTCTCGATGTCGGCTGCAAGACCGTCGCTAAC 583928 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 |||||||| |||||||| || |||||||| ||||||||||| |||||| || Sbjct 583929 ATGATCAAAGGCAAGTCCCCTGAGGAGATTCGCAAGACCTTCAACATCCAG 583979 >seq11 Length=1394339 Score = 123 bits (136), Expect = 3e-22 Identities = 92/108 (85%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||||| || |||||| |||| | ||| |||| |||||| |||| || || Sbjct 341728 GCCGCCAACTACCTTGATATCAAGGCTCTCTTGGATGTTGGATGCAAGACTGTCGCAAAT 341669 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293 ||||||||||||||||| |||||||||||||| ||||| || |||||| Sbjct 341668 ATGATCAAGGGCAAGTCCCCCGAGGAGATCCGTAAGACATTCAACATC 341621 >seq6 Length=2103670 Score = 102 bits (112), Expect = 1e-15 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| ||||| || || ||||| |||||||| || | |||||||| ||| Sbjct 1552971 GACAGCATCGGTGGCACCGTAACCTGCGTAATCCGCAACGTCCCTGTCGGCCTCGGTGAG 1552912 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| || || | || || |||| |||||||||||| ||||| |||||| Sbjct 1552911 CCCTGCTTCGATAAACTTGAAGCAAAACTCGGCCACGCCATGCTCAGCATCCCCGCCACC 1552852 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT 19192 ||||| ||||| || ||| ||| || Sbjct 1552851 AAGGGCTTCGAAATCGGCTCCGGCTT 1552826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107135096765850