Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq8 152 8e-31 seq3 136 6e-26 seq15 120 5e-21 seq1 113 7e-19 seq11 105 1e-16 >seq8 Length=1820348 Score = 152 bits (168), Expect = 8e-31 Identities = 285/423 (67%), Gaps = 4/423 (1%) Strand=Plus/Minus Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631 ||| || || ||||||||||||||||| | || |||| |||||||||| |||||| Sbjct 1046249 ACTCGATGATCTCGGTGCACAGGTTGGAG--CTGCGGATGGTACCCAGGTTCTTCTGGTT 1046192 Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691 ||| || ||| |||||||||| |||||| |||| ||| |||||| |||| || Sbjct 1046191 GCTCTTCTTGTTACAAGCGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGC 1046132 Query 2071692 CGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNN 2071751 | || |||||| |||| | | | || | | || | ||||||||| Sbjct 1046131 CTCGAGGATGGCATACCACAGCTTCTGGGCCTTAATGGTGGAGCGGCCGCGGCCCTCCTT 1046072 Query 2071752 NNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGC 2071811 |||| || || || || |||||| | || |||||||| || Sbjct 1046071 CTCATAACGCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCAAGGCCGGGGGC 1046012 Query 2071812 CTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTC 2071871 |||| ||||| || || | |||||| || | | | || || ||| ||||| || Sbjct 1046011 CTCGTTGGGGCAGAATAGAGTCCAGTCTCCATTGGACTCGACACGCTTCATGAACAGATC 1045952 Query 2071872 GCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTT 2071931 | ||||||||| | || || || || || || ||| | |||||||| ||||||||||| Sbjct 1045951 GGGGGTCCACAGGGCATAGAACAGGTCACGGGCACGGATTTCCTCCTTACCGTGGTTCTT 1045892 Query 2071932 TTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGC 2071991 |||||||| | |||| || || |||||||| ||||| |||||| ||||||||| Sbjct 1045891 GCGGAGGTCGAGGAACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATGGCAAAGGC 1045832 Query 2071992 GCC 2071994 || Sbjct 1045831 ACC 1045829 Score = 87.8 bits (96), Expect = 3e-11 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||||||||| || |||| ||| | |||||||||||||| |||| ||||| || Sbjct 1045810 CTGGTCGACATAGCGGGCTGTGTTGTTGTACACGCGGAGCATGGGGACAATACCGTTCGA 1045751 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||| || || | | ||| | ||| | ||||| | ||| | | || Sbjct 1045750 GGTACCGTTAGTTCCGCCAATGTAAGAGCCAGTCGCGCGAATGCGGTGGATGTTCAGACC 1045691 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || || || | ||| ||||| | || || | |||| || |||||||| ||||| Sbjct 1045690 AATACCACCAGCAGTCTTTGAGATCATGGCACAGGTCTTCAAAGTATCGTAGATACCCTC 1045631 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGA 2073755 || ||| ||||||| || | ||| ||||| || Sbjct 1045630 AATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGA 1045595 >seq3 Length=2521181 Score = 136 bits (150), Expect = 6e-26 Identities = 210/295 (71%), Gaps = 11/295 (4%) Strand=Plus/Minus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436 || ||||||||||| || |||||||||||||| ||||| | |||| ||| ||||| Sbjct 1109177 AGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAG 1109118 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496 ||||| ||||||||||| || ||| | ||||| || ||||| || || | | Sbjct 1109117 AAGATACCCTCGACGGCAGCGAAGGCAACGAGACGGGAAGCAAAGGT----AGAATCACG 1109062 Query 794497 TTGTT-GATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGAT 794555 | || |||||| || ||||| || ||||| | | | |||| | || || || Sbjct 1109061 GTCTTGGATCCAGCGGATGGCCCAATCGGCCTTGCGCTTGATGCAGGGAATGGTTTCAAT 1109002 Query 794556 GGCGCGAAAGAGGT-GGTCC--TTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAG 794612 ||| ||||||| ||| | | || | || ||||||| |||||| ||||| || || Sbjct 1109001 GGCATCGAAGAGGTAGGTGCGTTGCTTG---GGCTCCTTGATGTAGGTATCGATAAGAAG 1108945 Query 794613 CGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||||||||||| |||||||| || || || |||||||| ||||| |||||| Sbjct 1108944 GGAGTAGGTCTCGGAGTGGATATTCTCCATCATAATCTGGAAACCATAGAAGCAG 1108890 Score = 123 bits (136), Expect = 4e-22 Identities = 177/246 (72%), Gaps = 5/246 (2%) Strand=Plus/Minus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || || || || ||| |||||| |||||||||||||| | || ||||| ||||||| Sbjct 1109519 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATG 1109460 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 | ||| |||||||| | ||||| ||||| | ||||| | | || || ||| Sbjct 1109459 AAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTGGTTACCGAGAGCGACCAGGAGACGG 1109400 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGA--TGAGCGCCA 794085 || |||||||| ||||||||||||||||| || |||||||||||||| |||||| | Sbjct 1109399 TCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGCGTTCATGCCGAGCAGAGCGCAA 1109340 Query 794086 CGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCC 794145 || || | || | | ||||||| ||| || | || ||||| | ||||| | || Sbjct 1109339 --GGAAGAGCGTCAGTCAGGAACTCTTGCTCAATTCCAACAGCCTCAACAATGATGT-CC 1109283 Query 794146 TGGGCA 794151 ||| || Sbjct 1109282 TGGACA 1109277 >seq15 Length=621388 Score = 120 bits (132), Expect = 5e-21 Identities = 93/111 (84%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||| ||||||||||||||| | || |||||| | || ||||||||||| || ||| Sbjct 583869 GCCGCCAATTACCTCGACATCAAGGCTCTTCTCGATGTCGGCTGCAAGACCGTCGCTAAC 583928 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 | ||||| |||||||| || ||||| || ||||||||||| |||||| || Sbjct 583929 ATGATCAAAGGCAAGTCCCCTGAGGAGATTCGCAAGACCTTCAACATCCAG 583979 >seq1 Length=6574720 Score = 113 bits (124), Expect = 7e-19 Identities = 120/156 (77%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| |||||||||||||| |||||||||||| ||||||| || ||| | | Sbjct 3035521 GTACTTGGTGACAGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCCAGCTCACCGGGGAG 3035462 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 |||||| ||||||| ||||||||||| || | | ||| ||| |||||| || | Sbjct 3035461 GATCAGCCGCACGGAAGTCTGGATCTCTCGCGAGGAGATGGTGGACTTCTTGTT-GTAAG 3035403 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGA 1485625 | ||||| | |||||| ||| | | ||| |||| Sbjct 3035402 CAGCCAGCTTGGAGGCCTCAGTGGCAACGCGCTCGA 3035367 >seq11 Length=1394339 Score = 105 bits (116), Expect = 1e-16 Identities = 88/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||||||||| || |||||| | ||| | ||| | || |||||||| || || || Sbjct 341728 GCCGCCAACTACCTTGATATCAAGGCTCTCTTGGATGTTGGATGCAAGACTGTCGCAAAT 341669 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATC 2035754 | |||||||||||||| |||||||| ||||| ||||| || |||||| Sbjct 341668 ATGATCAAGGGCAAGTCCCCCGAGGAGATCCGTAAGACATTCAACATC 341621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916241081271950