Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3 176 6e-38 seq8 109 8e-18 >seq3 Length=2521181 Score = 176 bits (194), Expect = 6e-38 Identities = 355/513 (69%), Gaps = 24/513 (5%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||||||||| || || ||||||||||||||| | || | Sbjct 1108677 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGATC 1108735 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 | | || |||| ||||| ||| ||| ||| || ||||| | ||| Sbjct 1108736 TGTCCAAGGATCTTCACG----ACTGGCACAACCGCCTGAACGATGATGAGCGTTACTTC 1108791 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 || ||||| || || ||| ||||||||| || ||||| || |||||||| | Sbjct 1108792 GTCTCTCACGTTCTTGC-TTTCTTCGCCGCCTCTGACGGCATTGTCAATGAGAACCTTGT 1108850 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | || || | |||||||| | | ||||| || | || || || |||||||| Sbjct 1108851 TGAGCGTTTCAGCGCTGAGGTCCAGGTCACTGAGGCTCGCTGCTTCTATGGTTTCCAGAT 1108910 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 || || || |||||||| || |||||||| || || ||||| |||||| ||||||| Sbjct 1108911 TATGATGGAGAATATCCACTCCGAGACCTACTCCCTTCTTATCGATACCTACATCAAGGA 1108970 Query 1456068 CCCGGTCGAGAA--GGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAA 1456124 || | || | | ||| ||||||| ||||| || || | || | | | | Sbjct 1108971 GCC---CAAGCAACGCACCTACCTCTTCGATGCCATTGAAACCATTCCCTGCATCAAGCG 1109027 Query 1456125 AAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGG-GCCTCGACACTTTGCCGAGCG 1456183 |||||||| ||||| || |||||| |||| | | || || |||||| || Sbjct 1109028 CAAGGCCGATTGGGCCATCCGCTGGATC--CAAGACCGTGATTCTAC-CTTTGCTTCCCG 1109084 Query 1456184 GCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTT 1456242 ||||| | ||| || || |||||||| ||||| ||||| ||| |||| | | ||||| Sbjct 1109085 TCTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCTATCTT 1109144 Query 1456243 TTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||||||||| || |||||||||||||| Sbjct 1109145 CTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCT 1109177 Score = 116 bits (128), Expect = 5e-20 Identities = 182/253 (72%), Gaps = 8/253 (3%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 ||||| || ||||| || | || ||| ||||||| | | || | || || | ||| Sbjct 1109287 ATCATTGTTGAGGCTGTTGGAATTGAGCAAGAGTTCCTGACTGACGCTCTTCC--TTGCG 1109344 Query 1456583 CTCA--TCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCG 1456640 ||| ||||||||||||||| ||| ||||||||||||||||| || ||||| ||||| Sbjct 1109345 CTCTGCTCGGCATGAACGCCAA-GCTGATGTGCCAGTACATTGAGTTC-GTCGCTGACCG 1109402 Query 1456641 CCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGA 1456700 || || | || ||||| | ||||| ||||| | |||||||| ||| | | Sbjct 1109403 TCTCCTGGTCGCTCTCGGTAACC-AGAAGTACTACAACTCTGCCAACCCCTTCGACTTCA 1109461 Query 1456701 TGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACG 1456759 |||||| ||||| || | |||||||||||||| |||||| || || || || ||| Sbjct 1109462 TGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACC 1109521 Query 1456760 CCAAGGCCGGCGT 1456772 |||||||| || Sbjct 1109522 AGAAGGCCGGTGT 1109534 >seq8 Length=1820348 Score = 109 bits (120), Expect = 8e-18 Identities = 279/428 (65%), Gaps = 8/428 (2%) Strand=Plus/Plus Query 261806 GGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTGGCTGGACCTC 261865 || ||||||||| |||||| || || |||||||| || || || | | || |||||| Sbjct 1045829 GGTGCCTTTGCCATCTACCTTGAGCCATGGCACGCGGATGTCTTCGAGTTCCTCGACCTC 1045888 Query 261866 AAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTTTTACGGCCTG 261925 ||||||||||| |||| ||| | ||| || || | | || || || | |||| Sbjct 1045889 CGCAAGAACCACGGTAAGGA----GGAAATCCGTGCCCGTG--ACCTGTTCTATGCCCTG 1045942 Query 261926 TGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTCGCTCTTTTGC 261985 ||||| ||| ||||| ||| || | | | || | |||||| | || || ||| Sbjct 1045943 TGGACCCCCGATCTGTTCATGAAGCGTGTCGAGTCCAATGGAGACTGGACTCTATTCTGC 1046002 Query 261986 CCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGCCCTCTATGAG 262045 || |||||| |||||||| || ||| |||| | || || || ||||| ||| Sbjct 1046003 CCCAACGAGGCCCCCGGCCTTGCTGATGTCTACGGCGACGAGTTCGAGGCTCTCTACGAG 1046062 Query 262046 NNNNNNNNNNNNNNNNNNNNNNCGCGGACCGTCGTGCCCGCACGACAGATCTGGTCGGCC 262105 || || | | || | || | |||| ||| Sbjct 1046063 CGTTATGAGAAGGAGGGCCGCGGCCGCTCCACCATTAAGGCCCAGAAGCTGTGGTATGCC 1046122 Query 262106 ATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAGGACGCCGTCAAC 262165 || ||| ||| || | |||||| || | |||| |||| ||||||||||||| ||| Sbjct 1046123 ATCCTCGAGGCTCAGACCGAGACTGGTAACCCCTTCATGCTCTACAAGGACGCTTGTAAC 1046182 Query 262166 CTGACCAGCAACCAGCAGAACCTGGGCACCA-CGACAGAGGCCAACCTGTGCACCGAGAT 262224 || ||||||||| |||||||||| |||| | ||| ||||||||||||||||||| Sbjct 1046183 AAGAAGAGCAACCAGAAGAACCTGGGTACCATCCGCAG-CTCCAACCTGTGCACCGAGAT 1046241 Query 262225 CGTCCAGT 262232 | || ||| Sbjct 1046242 CATCGAGT 1046249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177806377408100