Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq8 163 4e-35 seq3 105 9e-18 >seq8 Length=1820348 Score = 163 bits (180), Expect = 4e-35 Identities = 681/1065 (64%), Gaps = 10/1065 (1%) Strand=Plus/Minus Query 69351 GATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAA 69410 ||| || ||||| || | ||| || ||||| |||||||| ||||||||||| || || || Sbjct 1046215 GATGGTACCCAGGTTCTTCTGGTTGCTCTTCTTGTTACAAGCGTCCTTGTAGAGCATGAA 1046156 Query 69411 CGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTAT 69470 || ||||||| || |||||| |||| || | | ||| | | || || || Sbjct 1046155 GGGGTTACCAGTCTCGGTCTGAGCCTCGAGGATGGCATACCACAGCTTCTGGGCCTTAAT 1046096 Query 69471 TACGGTCTTGTAACGCTTCTCTTTTTCATATTGT--GTATATAGCCGTTCGAATTCATCT 69528 || | || ||| || ||||| | ||| | |||| ||||| || || Sbjct 1046095 GGTGGAGCGGCCGCGGCCCTCCTTCTCATAACGCTCGTAGAGAGCC--TCGAACTCGTCG 1046038 Query 69529 CCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCA 69588 || | |||||| | | || || || || || || | | | ||| | ||| Sbjct 1046037 CCGTAGACATCAGCAAGGCCGGGGGCCTCGTTGGGGCAGAATAGAGTCCAGTCTCCATTG 1045978 Query 69589 TCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGT 69647 || || || ||||| || |||||||| |||| || || ||| || || || | || Sbjct 1045977 GACTCGACACGCTTCATGAACAGATCGGGGGTCCACAGGGC-ATAGAACAGGTCACGGGC 1045919 Query 69648 TCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATG 69707 | |||| || || || || || || ||||| ||||| | | ||| | || Sbjct 1045918 ACGGATTTCCTCCTTACCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGACATCCGCGTG 1045859 Query 69708 CCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTA 69767 |||||| || || || || || | | | || || || || ||||| ||||| || | || Sbjct 1045858 CCATGGCTCAAGGTAGATGGCAAAGGCACCGGGACGCTTGTTTCCACCCTGGTCGACATA 1045799 Query 69768 TCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGT 69827 | ||| ||||| || || || | ||||| || | |||||| || || |||| || || Sbjct 1045798 GCGGGCTGTGTTGTTGTACACGCGGAGCATGGGGACAATACCGTTCGAGGTACCGTTAGT 1045739 Query 69828 TCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGC 69887 ||| ||| ||| || | |||||||| || ||||| || || || || Sbjct 1045738 TCCGCCAATGTAAGAGCCAGTCGCGCGAATGCGGTGGATGTTCAGACCAATACCACCAGC 1045679 Query 69888 CATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATC 69947 | || ||||| | ||||| ||||| || || || |||||||| ||||| || || Sbjct 1045678 AGTCTTTGAGATCATGGCACAGGTCTTCAAAGTATCGTAGATACCCTCAATGCTGTCCTC 1045619 Query 69948 TATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAA 70007 |||| | || || || || | || ||| | || || || || || || | Sbjct 1045618 CTTCATATCAACCAGGAAGCAAGAGGCCAGTTGGGGCTGGGGGGTACCAGCGTTGAACAG 1045559 Query 70008 TGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGA 70067 || ||||| ||||||||||| | |||| ||| | || | ||| || ||||| || Sbjct 1045558 GGTTGGAGAAGCGTGAGTGAAGTACTTTTGAGACATCAAGTGGTAGGTCTCAATGGCCTT 1045499 Query 70068 TTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTT 70126 || |||||| | | | ||||| || | || |||||||||| || |||||||| || | Sbjct 1045498 CTCAATATCCTCTCCG-TGAATACCAACAGCAACACGCATCAGCAGGTGCTGAGGACGCT 1045440 Query 70127 CTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAAT 70186 | | ||| || || | ||| ||||| ||||| || || || || || Sbjct 1045439 CAGCGACTTTGCCATCAATACGGAGCAGATATGAACGCTCCAGGGTCTTGAAGCCGAAGA 1045380 Query 70187 AGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGG 70246 ||||||| ||||| | ||||| | ||| | || || || | ||| || || | Sbjct 1045379 AGTTGTAGTTGAAGTCACGGTCGTAGACAATGGCGGAGTTAAGCTCATCAGCATGCTTTG 1045320 Query 70247 TAACTATATCCATAACAGTAGGTG-AGATAATCGGAGATCGTTTACCATTTTTAGGATTA 70305 |||| || || ||| | || |||| || |||| | || || || || || Sbjct 1045319 TAACAATCTC-ATAGATATCTTTGGAGATCATAGGAGCGGGCTTGTTGTTCTTGGGGTTG 1045261 Query 70306 ACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAA 70365 ||||||| | | | || || || | |||| | || || || | |||||| | Sbjct 1045260 ACATAGTGGTAGAGGTCGGAGATGACCATAGAAAATTGCTTCTTGGTCTGCTTGTGAAGG 1045201 Query 70366 TTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGT 70410 || || | || || | ||||| || ||||||||||| || ||| Sbjct 1045200 TTAGACACAGCGATACGAGCTGCCAGGATAGCATAGTCGGGGTGT 1045156 >seq3 Length=2521181 Score = 105 bits (116), Expect = 9e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 |||| | ||||||||||||| || || |||||||| | || | |||||||| Sbjct 1109243 AACAGAAGGCAGGCGAAGTCAGTGTGCAGACCCTCATCACGGGAGATGAGCTCGTTAGAG 1109184 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || || || ||||| ||||||||||| |||||||| || || | || ||||| ||| Sbjct 1109183 AAGGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCA 1109124 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765 || |||||||| || || || || || || ||||| || Sbjct 1109123 GAGAAGAAGATACCCTCGACGGCAGCGAAGGCAACGAG 1109086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908370682000