Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq8 237 2e-57 seq3 118 1e-21 seq2 93.3 5e-14 >seq8 Length=1820348 Score = 237 bits (262), Expect = 2e-57 Identities = 578/866 (67%), Gaps = 21/866 (2%) Strand=Plus/Minus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || ||||| | || ||||| ||||| ||||| |||||| | | ||||||| | Sbjct 1046301 GGGAGGGCAAGGGAGGCCAAGTTGCAGACAGCGACCTCATCAGGAGCACTGTACTCGATG 1046242 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | |||||| || || || |||| ||||| ||||| ||||||||| Sbjct 1046241 ATCTCGGTGCACAGGTTGGAGCTGCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCTTG 1046182 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 || || || ||||||||||||||| |||| | || ||||| ||||| | | ||| || Sbjct 1046181 TTACAAGCGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCGAGGATG 1046122 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCG--TTGGCC-CGTCCCTCCGCCTCGTA 111465 || | ||| | | || | | || ||||| | |||| || |||||| ||| || Sbjct 1046121 GCATACCACAGCTTCTGGGCCT----TAATGGTGGAGCGGCCGCGGCCCTCCTTCTCATA 1046066 Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 111525 |||||| || || ||||| || || | || | || || || |||| || Sbjct 1046065 ACGCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCAAGGCCGGGGGCCTCGTT 1046006 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 || ||||| |||| ||| | ||| ||| || ||||||||||| || || || | Sbjct 1046005 GGGGCAGAATAGAGTCCAGTCTCCATTGGACTCGACACGCTTCATGAACAGATCGGGGGT 1045946 Query 111586 CCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 111644 |||||||| | || || || | ||| || || || | ||| ||||| || | Sbjct 1045945 CCACAGGGCATAGAACAGGTCACGGGCACGGA-TTTCCTCCTTACCGTGGTTCTTGCGGA 1045887 Query 111645 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCT 111704 || |||||||| | || ||||||||||||||||||||| |||| || | | || Sbjct 1045886 GGTCGAGGAACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACC-- 1045829 Query 111705 TTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 111758 ||||| ||| | || | |||||||| |||||| ||| | ||||| |||| Sbjct 1045828 -GGGACGCTTGTTTCCACCCTGGTCGACATAGCGGGCTGTGTTGTTGTACACGCGGAGCA 1045770 Query 111759 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 111818 | || | |||||| | || ||| || || || | ||| ||| | | || | | Sbjct 1045769 TGGGGACAATACCGTTCGAGGTACCGTTAGTTCCGCCAATGTAAGAGCCAGTCGCGCGAA 1045710 Query 111819 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 111878 ||||||| || |||||||| ||||| ||||||||| ||||| | | | Sbjct 1045709 TGCGGTGGATGTTCAGACCAATACCACCAGCAGTCTTTGAGATCATGGCACAGGTCTTCA 1045650 Query 111879 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 111938 ||| | |||||||| | || ||||||||| | | | ||||||||| || || Sbjct 1045649 AAGTATCGTAGATACCCTCAATGCTGTCCTCCTTCATATCAACCAGGAAGCAAGAGGCCA 1045590 Query 111939 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC-CT 111997 || || || |||||||| ||||| |||||||| | |||||| |||| ||| | Sbjct 1045589 GTTGGGGCTGGGGGGTACCAGCGTTGAACAGGGTTGGAGAAGCGTGAGTGAA-GTACTTT 1045531 Query 111998 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057 || |||||| || ||| ||||| | | | ||||| || || ||||| || || | Sbjct 1045530 TGAGACATCAAGTGGTAGGTCTCAATGGCCTTCTCAATATCCTCTCCGTGAATACCAACA 1045471 Query 112058 GCGACCCGCATGAACATGTACTGTGG 112083 || || ||||| | || || ||| || Sbjct 1045470 GCAACACGCATCAGCAGGTGCTGAGG 1045445 >seq3 Length=2521181 Score = 118 bits (130), Expect = 1e-21 Identities = 278/417 (67%), Gaps = 2/417 (0%) Strand=Plus/Minus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| ||||| |||||||| |||||||||||||| ||| | ||| ||| ||||| Sbjct 1109519 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATG 1109460 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAA-ATGGGTGGCACCCCAACTTGTTTGAGGAGACG 122489 ||||| || || || | ||| | | ||| || | | |||||||| Sbjct 1109459 AAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTGGTTACCGAGAGCGACC-AGGAGACG 1109401 Query 122490 ATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 122549 || | || |||||||||||| | ||||| || | |||||| |||| || || Sbjct 1109400 GTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGCGTTCATGCCGAGCAGAGCGCA 1109341 Query 122550 TGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTG 122609 || || ||||| | |||| ||| |||||| |||| ||||| | |||| | || Sbjct 1109340 AGGAAGAGCGTCAGTCAGGAACTCTTGCTCAATTCCAACAGCCTCAACAATGATGTCCTG 1109281 Query 122610 GATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCCTG 122669 || | | | |||| | || || ||| || ||| || || Sbjct 1109280 GACAACCTGCTTGCTGGGGCGGTTGTTCAGGTGGGAGAACAGAAGGCAGGCGAAGTCAGT 1109221 Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| ||||||||||| ||||| || || || || |||||| ||||| ||||||||||| Sbjct 1109220 GTGCAGACCCTCATCACGGGAGATGAGCTCGTTAGAGAAGGTCAGACCGGGCATGAGACC 1109161 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCAC 122786 |||||||| | ||| | |||| | ||| || || ||||||||||||||||| || Sbjct 1109160 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCGAC 1109104 >seq2 Length=3417088 Score = 93.3 bits (102), Expect = 5e-14 Identities = 157/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689 |||||||||||||||||||||| || || || ||||| || || || | || ||| Sbjct 1109215 GCATCAATCTCATCAATGAAGATGATGCAAGGAGTATTTTTACGAGCATTTGCGAACAGA 1109156 Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAG-CA 11748 || || || | || ||| |||||||| |||||||| || || | | || | || Sbjct 1109155 TCACGGACACGCGAGGGACCAACACCAACGAACATCTCAACGAATTCGGAACCACTGACA 1109096 Query 11749 CTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGT 11808 ||| | ||| || || |||||||| ||| | || || || |||||||| || || Sbjct 1109095 CTGTA-GAAAGGCACGCCAGATTCACCAGCGGTAGCCTTAGCAAGAAGGGTCTTACCAGT 1109037 Query 11809 ACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853 ||| || || | ||||| || || ||||| ||||| ||||| Sbjct 1109036 ACCAGGGGGTCCAGAGAGAATAGCACCACGGGGAATCTTAGCACC 1108992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031607480000