Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09]
50 sequences; 33,998,198 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq8 239 5e-58
seq3 125 8e-24
seq2 109 6e-19
>seq8
Length=1820348
Score = 239 bits (264), Expect = 5e-58
Identities = 577/865 (67%), Gaps = 15/865 (2%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| || || | ||||| || || | |||||||| || || || ||||| | |
Sbjct 1045445 CCTCAGCACCTGCTGATGCGTGTTGCTGTTGGTATTCACGGAGAGGATATTGAGAAGGCC 1045504
Query 104282 TTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||| ||| || |||||| ||| ||| |||| |||||| | |||||||| ||
Sbjct 1045505 ATTGAGACCTACCACTTGATGTCTCAAAAGTAC-TTCACTCACGCTTCTCCAACCCTGTT 1045563
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||| |||||||| || |||||| || || ||||||||| | | | ||||||||
Sbjct 1045564 CAACGCTGGTACCCCCCAGCCCCAACTGGCCTCTTGCTTCCTGGTTGATATGAAGGAGGA 1045623
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
| || | |||||||| | ||| | | | ||||| ||||||||| |||||
Sbjct 1045624 CAGCATTGAGGGTATCTACGATACTTTGAAGACCTGTGCCATGATCTCAAAGACTGCTGG 1045683
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
|||||||| || ||||||| | | || | | ||| ||| | || || ||
Sbjct 1045684 TGGTATTGGTCTGAACATCCACCGCATTCGCGCGACTGGCTCTTACATTGGCGGAACTAA 1045743
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
||| || | |||||| | || ||||| ||||| | ||| |||||| ||||||||
Sbjct 1045744 CGGTACCTCGAACGGTATTGTCCCCATGCTCCGCGTGTACAACAACACAGCCCGCTATGT 1045803
Query 104581 AAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634
| || | ||| ||||| || | | || |||| ||||||||||||||
Sbjct 1045804 CGACCAGGGTGGAAACAAGCGTCCC---GGTGCCTTTGCCATCTACCTTGAGCCATGGCA 1045860
Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694
||||||| || | |||||||| || | || ||||| ||| | ||||| ||
Sbjct 1045861 CGCGGATGTCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGTAAGGAGGAAATCCGTGC 1045920
Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754
||| || || |||| || || |||| || ||||| ||||||||| | || ||| |
Sbjct 1045921 CCGTGACCTGTTCTATGCCCTGTGGACCCCCGATCTGTTCATGAAGCGTGTCGAGTCCAA 1045980
Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814
||| | ||| |||| || || || || |||| || || || | |||| | || ||
Sbjct 1045981 TGGAGACTGGACTCTATTCTGCCCCAACGAGGCCCCCGGCCTTGCTGATGTCTACGGCGA 1046040
Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGACGGTGC 104873
||||| || || || ||| || ||| | || || || ||| || | || |
Sbjct 1046041 CGAGTTCGAGGCTCTCTACGAGCGTTATGAGAAGGAGGGCCGCGGCCGCT-CCACCAT-T 1046098
Query 104874 CAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAC 104932
|| | || | ||||| | || || ||| || |||| ||||||||||||| || | |
Sbjct 1046099 AAGGCCCAGAAGCTGTGGTATGCCATCCTCGAGGCTCAGACCGAGACTGGTAACCCCTTC 1046158
Query 104933 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 104992
||||| ||||| ||||| |||||| | ||||| || || ||||| ||||| |||
Sbjct 1046159 ATGCTCTACAAGGACGCTTGTAACAAGAAGAGCAACCAGAAGAACCTGGGTACCATCCGC 1046218
Query 104993 AGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 105052
|| ||||| || || || || ||| | || | | | |||||| ||||| ||
Sbjct 1046219 AGCTCCAACCTGTGCACCGAGATCATCGAGTACAGTGCTCCTGATGAGGTCGCTGTCTGC 1046278
Query 105053 AACCTCGCATCAATCGCTCTCCCCA 105077
||| | || || | || |||||||
Sbjct 1046279 AACTTGGCCTCCCTTGCCCTCCCCA 1046303
>seq3
Length=2521181
Score = 125 bits (138), Expect = 8e-24
Identities = 117/149 (79%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855
|||||||| || ||| | || || || || |||||||||||||||||||| || |
Sbjct 1109072 CCTTTGCTTCCCGTCTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCTT 1109131
Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915
|| | |||| | |||||||||||||| ||||||||||| ||||| |||||| ||||
Sbjct 1109132 TCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCTAACG 1109191
Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|||| ||||| ||||| ||||| || |||
Sbjct 1109192 AGCTCATCTCCCGTGATGAGGGTCTGCAC 1109220
>seq2
Length=3417088
Score = 109 bits (120), Expect = 6e-19
Identities = 168/236 (71%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 9694 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 9753
|||||| | |||||||||||||||||||||| |||||| || ||||| |||||
Sbjct 1109225 CTTTCCAATAGCATCAATCTCATCAATGAAGATGATGCAAGGAGTATTTTTACGAGCATT 1109166
Query 9754 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG- 9812
| | || ||||| || |||||| || || |||||||| |||||||| || || | |
Sbjct 1109165 TGCGAACAGATCACGGACACGCGAGGGACCAACACCAACGAACATCTCAACGAATTCGGA 1109106
Query 9813 -CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871
| | | ||| || | ||| || || ||||||||| || | || || |||||
Sbjct 1109105 ACCACTG-ACACTGTA-GAAAGGCACGCCAGATTCACCAGCGGTAGCCTTAGCAAGAAGG 1109048
Query 9872 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927
|||||||| ||||| || || | ||| | ||||| || |||||||| || ||
Sbjct 1109047 GTCTTACCAGTACCAGGGGGTCCAGAGAGAATAGCACCACGGGGAATCTTAGCACC 1108992
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260435462000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |