Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq8 239 5e-58 seq3 125 8e-24 seq2 109 6e-19 >seq8 Length=1820348 Score = 239 bits (264), Expect = 5e-58 Identities = 577/865 (67%), Gaps = 15/865 (2%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| || || | ||||| || || | |||||||| || || || ||||| | | Sbjct 1045445 CCTCAGCACCTGCTGATGCGTGTTGCTGTTGGTATTCACGGAGAGGATATTGAGAAGGCC 1045504 Query 104282 TTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || |||||| ||| ||| |||| |||||| | |||||||| || Sbjct 1045505 ATTGAGACCTACCACTTGATGTCTCAAAAGTAC-TTCACTCACGCTTCTCCAACCCTGTT 1045563 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| |||||||| || |||||| || || ||||||||| | | | |||||||| Sbjct 1045564 CAACGCTGGTACCCCCCAGCCCCAACTGGCCTCTTGCTTCCTGGTTGATATGAAGGAGGA 1045623 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | || | |||||||| | ||| | | | ||||| ||||||||| ||||| Sbjct 1045624 CAGCATTGAGGGTATCTACGATACTTTGAAGACCTGTGCCATGATCTCAAAGACTGCTGG 1045683 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 |||||||| || ||||||| | | || | | ||| ||| | || || || Sbjct 1045684 TGGTATTGGTCTGAACATCCACCGCATTCGCGCGACTGGCTCTTACATTGGCGGAACTAA 1045743 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 ||| || | |||||| | || ||||| ||||| | ||| |||||| |||||||| Sbjct 1045744 CGGTACCTCGAACGGTATTGTCCCCATGCTCCGCGTGTACAACAACACAGCCCGCTATGT 1045803 Query 104581 AAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634 | || | ||| ||||| || | | || |||| |||||||||||||| Sbjct 1045804 CGACCAGGGTGGAAACAAGCGTCCC---GGTGCCTTTGCCATCTACCTTGAGCCATGGCA 1045860 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 ||||||| || | |||||||| || | || ||||| ||| | ||||| || Sbjct 1045861 CGCGGATGTCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGTAAGGAGGAAATCCGTGC 1045920 Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754 ||| || || |||| || || |||| || ||||| ||||||||| | || ||| | Sbjct 1045921 CCGTGACCTGTTCTATGCCCTGTGGACCCCCGATCTGTTCATGAAGCGTGTCGAGTCCAA 1045980 Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814 ||| | ||| |||| || || || || |||| || || || | |||| | || || Sbjct 1045981 TGGAGACTGGACTCTATTCTGCCCCAACGAGGCCCCCGGCCTTGCTGATGTCTACGGCGA 1046040 Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGACGGTGC 104873 ||||| || || || ||| || ||| | || || || ||| || | || | Sbjct 1046041 CGAGTTCGAGGCTCTCTACGAGCGTTATGAGAAGGAGGGCCGCGGCCGCT-CCACCAT-T 1046098 Query 104874 CAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAC 104932 || | || | ||||| | || || ||| || |||| ||||||||||||| || | | Sbjct 1046099 AAGGCCCAGAAGCTGTGGTATGCCATCCTCGAGGCTCAGACCGAGACTGGTAACCCCTTC 1046158 Query 104933 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 104992 ||||| ||||| ||||| |||||| | ||||| || || ||||| ||||| ||| Sbjct 1046159 ATGCTCTACAAGGACGCTTGTAACAAGAAGAGCAACCAGAAGAACCTGGGTACCATCCGC 1046218 Query 104993 AGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 105052 || ||||| || || || || ||| | || | | | |||||| ||||| || Sbjct 1046219 AGCTCCAACCTGTGCACCGAGATCATCGAGTACAGTGCTCCTGATGAGGTCGCTGTCTGC 1046278 Query 105053 AACCTCGCATCAATCGCTCTCCCCA 105077 ||| | || || | || ||||||| Sbjct 1046279 AACTTGGCCTCCCTTGCCCTCCCCA 1046303 >seq3 Length=2521181 Score = 125 bits (138), Expect = 8e-24 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 |||||||| || ||| | || || || || |||||||||||||||||||| || | Sbjct 1109072 CCTTTGCTTCCCGTCTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCTT 1109131 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 || | |||| | |||||||||||||| ||||||||||| ||||| |||||| |||| Sbjct 1109132 TCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCTAACG 1109191 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||| ||||| ||||| ||||| || ||| Sbjct 1109192 AGCTCATCTCCCGTGATGAGGGTCTGCAC 1109220 >seq2 Length=3417088 Score = 109 bits (120), Expect = 6e-19 Identities = 168/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 9694 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 9753 |||||| | |||||||||||||||||||||| |||||| || ||||| ||||| Sbjct 1109225 CTTTCCAATAGCATCAATCTCATCAATGAAGATGATGCAAGGAGTATTTTTACGAGCATT 1109166 Query 9754 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG- 9812 | | || ||||| || |||||| || || |||||||| |||||||| || || | | Sbjct 1109165 TGCGAACAGATCACGGACACGCGAGGGACCAACACCAACGAACATCTCAACGAATTCGGA 1109106 Query 9813 -CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871 | | | ||| || | ||| || || ||||||||| || | || || ||||| Sbjct 1109105 ACCACTG-ACACTGTA-GAAAGGCACGCCAGATTCACCAGCGGTAGCCTTAGCAAGAAGG 1109048 Query 9872 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 |||||||| ||||| || || | ||| | ||||| || |||||||| || || Sbjct 1109047 GTCTTACCAGTACCAGGGGGTCCAGAGAGAATAGCACCACGGGGAATCTTAGCACC 1108992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260435462000