Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq8 221 1e-52 >seq8 Length=1820348 Score = 221 bits (244), Expect = 1e-52 Identities = 475/706 (67%), Gaps = 18/706 (3%) Strand=Plus/Plus Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301 |||||| ||| |||| ||| ||||||||||| || ||||| | |||||||||||||| Sbjct 1045507 TGAGACCTACCACTTGATGTCTCAAAAGTACTTCACTCACGCTTCTCCAACCCTGTTCAA 1045566 Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361 ||||||||| || || || || | ||||||||||| | |||||||| ||| Sbjct 1045567 CGCTGGTACCCCCCAGCCCCAACTGGCCTCTTGCTTCCTGGTTGATATGAAGGAGGACAG 1045626 Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421 || || || |||||||| || | ||| |||||| ||||| ||| | ||||| Sbjct 1045627 CATTGAGGGTATCTACGATACTTTGAAGACCTGTGCCATGATCTCAAAGACTGCTGGTGG 1045686 Query 53422 TATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAAC 53479 ||| ||| | || || | || | || |||| ||| | || || || ||| Sbjct 1045687 TATTGGTCTGAACA--TCCACCGCATTCGCGCGACTGGCTCTTACATTGGCGGAACTAAC 1045744 Query 53480 GGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTC 53539 || | | | || || || || ||||||||||| | ||||||||| ||||| || ||| Sbjct 1045745 GGTACCTCGAACGGTATTGTCCCCATGCTCCGCGTGTACAACAACACAGCCCGCTATGTC 1045804 Query 53540 AACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCC 53599 |||||||||| ||||| || | || ||||||||||| ||||| |||||||| Sbjct 1045805 GACCAGGGTGGAAACAAGCGTCCCGGTGCCTTTGCCATCTACCTTGAGCCATGGCACGCG 1045864 Query 53600 GACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGT 53659 || | | ||||| ||||| || || ||| || ||| | || || || || |||| Sbjct 1045865 GATGTCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGTAAGGAGGAAATCCGTGCCCGT 1045924 Query 53660 GACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAG 53719 |||||||| || ||||||| || || || |||||| | || ||| | | Sbjct 1045925 GACCTGTTCTATGCCCTGTGGACCCCCGATCTGTTCATGAAGCGTGTCGAGTCCAATGGA 1045984 Query 53720 GAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAG 53779 || ||| || | ||||| |||||| ||||||||| | ||||||||| || ||| Sbjct 1045985 GACTGGACTCTATTCTGCCCCAACGAGGCCCCCGGCCTTGCTGATGTCTACGGCGACGAG 1046044 Query 53780 TTTAACGAGATGTATCGGACGT------ACGCAGTTCAG-GGCCGCTACAAGAAGAAGGT 53832 || | | | || || ||| | | || | | ||||||| || | | Sbjct 1046045 TTCGAGGCTCTCTA-CGAGCGTTATGAGAAGGAGGGCCGCGGCCGCTCCACCA------T 1046097 Query 53833 CAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTA 53892 ||||| | || | ||| |||| |||||| || ||| ||||| || | || | Sbjct 1046098 TAAGGCCCAGAAGCTGTGGTATGCCATCCTCGAGGCTCAGACCGAGACTGGTAACCCCTT 1046157 Query 53893 CATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 |||| ||||||||| | ||| |||||||||||||||||||| Sbjct 1046158 CATGCTCTACAAGGACGCTTGTAACAAGAAGAGCAACCAGAAGAAC 1046203 Score = 111 bits (122), Expect = 2e-19 Identities = 108/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845 ||| || |||||||| |||||||||||||||||||| ||||||||| | || || | || Sbjct 1047034 TGCCGACCGTGGTGCCTACATCGACCAGTCCCAGTCGCTGAACATCCACCTGAAGGAGCC 1047093 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 | ||| |||| | | ||| |||||||| || ||||||| ||| || ||||| || Sbjct 1047094 CACCATGGGCAAGCTTACCTCCATGCACTTCGCTGGCTGGAAGATGGGTCTGAAGACCGG 1047153 Query 55906 TATGTACTATCTGCGGACC 55924 |||||||| ||||| ||| Sbjct 1047154 CATGTACTACCTGCGTACC 1047172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215657990000