Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09]
50 sequences; 33,998,198 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq7 192 1e-43
seq8 127 5e-24
seq2 102 2e-16
>seq7
Length=2000612
Score = 192 bits (212), Expect = 1e-43
Identities = 175/221 (79%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | || || ||||||||||||||||| || |||||||| ||||||| ||||||
Sbjct 1447262 CGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTG 1447321
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||||||||||||||||| || || |||||||| || |||||||| || |||| ||
Sbjct 1447322 CGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGGGGAATACCC 1447381
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||||||||||||||| |||||||| ||||| ||||| ||| || || || |
Sbjct 1447382 TCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATTGTGTCGGAGGACTCCACTTCCAAT 1447441
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || | |||||| || || | ||||||
Sbjct 1447442 GTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 1447482
Score = 167 bits (184), Expect = 5e-36
Identities = 170/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | ||| | || ||||| || |||||||| || || | ||||||
Sbjct 1447489 ACGAAGACGGAGAACCAAGTGCAATGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGGGT 1447548
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||| || |||||||| ||||| || || |||||||||||||| || | ||
Sbjct 1447549 GCGGCCATCTTCAAGTTGCTTGCCGGCGAAAATTAGACGTTGTTGGTCAGGGGGGATACC 1447608
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||| || |||||||| ||||| || || || ||||| || ||||||||| |
Sbjct 1447609 CTCCTTATCTTGGATCTTGCTCTTCACATTATCAATCGTGTCTGATGATTCAACCTCCAA 1447668
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||| ||||| || ||||||||||| ||||| | ||||||
Sbjct 1447669 AGTGATAGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 1447710
Score = 145 bits (160), Expect = 2e-29
Identities = 146/190 (77%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || ||||| || || || |||||||| || | |||||| | |||||
Sbjct 1448028 AGGACCAGGTGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAAAGGGTGCGGCCATCC 1448087
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| |||||| || ||||| || || || |||||||||||||| | ||||||||||||
Sbjct 1448088 TCCAACTGCTTTCCAGCGAAAATCAGACGCTGTTGGTCAGGAGGGATGCCTTCCTTGTCC 1448147
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || ||||| || || | || ||||| |||||||| |||
Sbjct 1448148 TGGATCTTGGACTTGACATTGTCGATAGTATCGCTGGACTCGACCTCAAGAGTGATGGTC 1448207
Query 211083 TTTCCCGTGA 211092
|| || ||||
Sbjct 1448208 TTGCCGGTGA 1448217
Score = 136 bits (150), Expect = 9e-27
Identities = 150/200 (75%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | |||||| || || ||||| ||||| || || || | ||||| | |||||
Sbjct 1447727 AGGACCAAGTGAAGGGTAGATTCTTTCTGGATATTGTAGTCGGACAGGGTACGGCCATCC 1447786
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||| || || |||||||| || || |||||||||||||| | || ||||| |||
Sbjct 1447787 TCAAGCTGTTTTCCAGCGAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATCC 1447846
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| ||||||||||| | |||||||| || ||||| |||
Sbjct 1447847 TGAATCTTGGACTTGACGTTATCGATGGTGTCGCTGGACTCAACCTCAAGGGTGATAGTC 1447906
Query 211083 TTTCCCGTGAGAGTCTTTAC 211102
|| || || | ||||| ||
Sbjct 1447907 TTGCCGGTCAAGGTCTTGAC 1447926
>seq8
Length=1820348
Score = 127 bits (140), Expect = 5e-24
Identities = 138/182 (76%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || || || | ||||| || ||||||||||| ||||||||
Sbjct 642764 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 642705
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| ||||||||||| || | || ||||||||||||||||| || ||||| |||
Sbjct 642704 AGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 642645
Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103
|||||||| ||| || || ||||| || || ||||| ||||| || ||||| ||
Sbjct 642644 ATGGTGTC---GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 642588
Query 211104 AA 211105
||
Sbjct 642587 AA 642586
Score = 96.9 bits (106), Expect = 8e-15
Identities = 185/273 (68%), Gaps = 0/273 (0%)
Strand=Plus/Minus
Query 178093 GTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCCCAC 178152
|||||| ||||||||||| || | || || ||||| |||||||| | ||
Sbjct 1046203 GTTCTTCTGGTTGCTCTTCTTGTTACAAGCGTCCTTGTAGAGCATGAAGGGGTTACCAGT 1046144
Query 178153 CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGC 178212
||| | |||||| |||| ||| || ||| |||| |||||| | || | |
Sbjct 1046143 CTCGGTCTGAGCCTCGAGGATGGCATACCACAGCTTCTGGGCCTTAATGGTGGAGCGGCC 1046084
Query 178213 TTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATC 178272
|| || ||||| || | |||||| ||||||| || || ||||||||| |
Sbjct 1046083 GCGGCCCTCCTTCTCATAACGCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGC 1046024
Query 178273 GAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTT 178332
|| ||||| ||||| ||||||||||| ||| |||| | || | || || || ||
Sbjct 1046023 AAGGCCGGGGGCCTCGTTGGGGCAGAATAGAGTCCAGTCTCCATTGGACTCGACACGCTT 1045964
Query 178333 CATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
|||||| || || | |||||| | |||||||||
Sbjct 1045963 CATGAACAGATCGGGGGTCCACAGGGCATAGAA 1045931
>seq2
Length=3417088
Score = 102 bits (112), Expect = 2e-16
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| |||||||| || ||||| || |||||||| || |||| ||||| | || ||
Sbjct 664636 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGACCGTCC 664695
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| |||||||| || |||||||| || || ||||||||||| || | || ||||||||
Sbjct 664696 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCAGGGGGGATACCCTCCTTGTC 664754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151257418250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |