Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq7 192 1e-43 seq8 127 5e-24 seq2 102 2e-16 >seq7 Length=2000612 Score = 192 bits (212), Expect = 1e-43 Identities = 175/221 (79%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || ||||||||||||||||| || |||||||| ||||||| |||||| Sbjct 1447262 CGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTG 1447321 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||||||||||||||| || || |||||||| || |||||||| || |||| || Sbjct 1447322 CGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGGGGAATACCC 1447381 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||||||||| |||||||| ||||| ||||| ||| || || || | Sbjct 1447382 TCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATTGTGTCGGAGGACTCCACTTCCAAT 1447441 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || || | |||||| || || | |||||| Sbjct 1447442 GTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 1447482 Score = 167 bits (184), Expect = 5e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | ||| | || ||||| || |||||||| || || | |||||| Sbjct 1447489 ACGAAGACGGAGAACCAAGTGCAATGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGGGT 1447548 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| || |||||||| ||||| || || |||||||||||||| || | || Sbjct 1447549 GCGGCCATCTTCAAGTTGCTTGCCGGCGAAAATTAGACGTTGTTGGTCAGGGGGGATACC 1447608 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||| || |||||||| ||||| || || || ||||| || ||||||||| | Sbjct 1447609 CTCCTTATCTTGGATCTTGCTCTTCACATTATCAATCGTGTCTGATGATTCAACCTCCAA 1447668 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||| ||||| || ||||||||||| ||||| | |||||| Sbjct 1447669 AGTGATAGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 1447710 Score = 145 bits (160), Expect = 2e-29 Identities = 146/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || ||||| || || || |||||||| || | |||||| | ||||| Sbjct 1448028 AGGACCAGGTGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAAAGGGTGCGGCCATCC 1448087 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||| || ||||| || || || |||||||||||||| | |||||||||||| Sbjct 1448088 TCCAACTGCTTTCCAGCGAAAATCAGACGCTGTTGGTCAGGAGGGATGCCTTCCTTGTCC 1448147 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||| || || | || ||||| |||||||| ||| Sbjct 1448148 TGGATCTTGGACTTGACATTGTCGATAGTATCGCTGGACTCGACCTCAAGAGTGATGGTC 1448207 Query 211083 TTTCCCGTGA 211092 || || |||| Sbjct 1448208 TTGCCGGTGA 1448217 Score = 136 bits (150), Expect = 9e-27 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||| || || ||||| ||||| || || || | ||||| | ||||| Sbjct 1447727 AGGACCAAGTGAAGGGTAGATTCTTTCTGGATATTGTAGTCGGACAGGGTACGGCCATCC 1447786 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| || || |||||||| || || |||||||||||||| | || ||||| ||| Sbjct 1447787 TCAAGCTGTTTTCCAGCGAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATCC 1447846 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||||||||| | |||||||| || ||||| ||| Sbjct 1447847 TGAATCTTGGACTTGACGTTATCGATGGTGTCGCTGGACTCAACCTCAAGGGTGATAGTC 1447906 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || || | ||||| || Sbjct 1447907 TTGCCGGTCAAGGTCTTGAC 1447926 >seq8 Length=1820348 Score = 127 bits (140), Expect = 5e-24 Identities = 138/182 (76%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || || || | ||||| || ||||||||||| |||||||| Sbjct 642764 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 642705 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| ||||||||||| || | || ||||||||||||||||| || ||||| ||| Sbjct 642704 AGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 642645 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| || || ||||| || || ||||| ||||| || ||||| || Sbjct 642644 ATGGTGTC---GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 642588 Query 211104 AA 211105 || Sbjct 642587 AA 642586 Score = 96.9 bits (106), Expect = 8e-15 Identities = 185/273 (68%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 178093 GTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCCCAC 178152 |||||| ||||||||||| || | || || ||||| |||||||| | || Sbjct 1046203 GTTCTTCTGGTTGCTCTTCTTGTTACAAGCGTCCTTGTAGAGCATGAAGGGGTTACCAGT 1046144 Query 178153 CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGC 178212 ||| | |||||| |||| ||| || ||| |||| |||||| | || | | Sbjct 1046143 CTCGGTCTGAGCCTCGAGGATGGCATACCACAGCTTCTGGGCCTTAATGGTGGAGCGGCC 1046084 Query 178213 TTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATC 178272 || || ||||| || | |||||| ||||||| || || ||||||||| | Sbjct 1046083 GCGGCCCTCCTTCTCATAACGCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGC 1046024 Query 178273 GAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTT 178332 || ||||| ||||| ||||||||||| ||| |||| | || | || || || || Sbjct 1046023 AAGGCCGGGGGCCTCGTTGGGGCAGAATAGAGTCCAGTCTCCATTGGACTCGACACGCTT 1045964 Query 178333 CATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 |||||| || || | |||||| | ||||||||| Sbjct 1045963 CATGAACAGATCGGGGGTCCACAGGGCATAGAA 1045931 >seq2 Length=3417088 Score = 102 bits (112), Expect = 2e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| || ||||| || |||||||| || |||| ||||| | || || Sbjct 664636 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGACCGTCC 664695 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || |||||||| || |||||||| || || ||||||||||| || | || |||||||| Sbjct 664696 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCAGGGGGGATACCCTCCTTGTC 664754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151257418250