Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq7 178 3e-39 seq8 111 4e-19 seq2 86.0 1e-11 >seq7 Length=2000612 Score = 178 bits (196), Expect = 3e-39 Identities = 172/221 (78%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || ||||| |||||||| || || |||| |||||||| | | || Sbjct 1447262 CGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTG 1447321 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | |||||||| |||||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct 1447322 CGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGGGGAATACCC 1447381 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| |||||||| |||||| ||||| ||||| |||| ||||| || || Sbjct 1447382 TCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATTGTGTCGGAGGACTCCACTTCCAAT 1447441 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| |||||||| || | ||| | ||||| Sbjct 1447442 GTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 1447482 Score = 131 bits (144), Expect = 4e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| | || || || || |||| ||||| |||| | || Sbjct 1447489 ACGAAGACGGAGAACCAAGTGCAATGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGGGT 1447548 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || ||||| || ||||| || || ||||||||||| || || ||||| Sbjct 1447549 GCGGCCATCTTCAAGTTGCTTGCCGGCGAAAATTAGACGTTGTTGGTCAGGGGGGATACC 1447608 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| ||||||||||| ||||||| || || |||||||| | ||| || || || Sbjct 1447609 CTCCTTATCTTGGATCTTGCTCTTCACATTATCAATCGTGTCTGATGATTCAACCTCCAA 1447668 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| |||||||| || | ||| || Sbjct 1447669 AGTGATAGTCTTGCCGGTGAGAGTCTT 1447695 Score = 131 bits (144), Expect = 4e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| | ||| || || |||||||| |||| |||||| |||| || || Sbjct 1447717 ACGCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATATTGTAGTCGGACAGGGT 1447776 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || ||||| || ||||||||||| || || |||||||| || || || || Sbjct 1447777 ACGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGTTGGTCAGGAGGGATGCC 1447836 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| || || ||||| ||| || ||||||||||| || || || || | Sbjct 1447837 CTCCTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCGCTGGACTCAACCTCAAG 1447896 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| |||||||| ||||| || || Sbjct 1447897 GGTGATAGTCTTGCCGGTCAAGGTCTT 1447923 Score = 118 bits (130), Expect = 3e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| |||||||| |||||||| || || | || || |||| | || Sbjct 1448018 ACGCAGGCGCAGGACCAGGTGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAAAGGGT 1448077 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || | |||||| |||||||| || || || |||||||| || || || || Sbjct 1448078 GCGGCCATCCTCCAACTGCTTTCCAGCGAAAATCAGACGCTGTTGGTCAGGAGGGATGCC 1448137 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| |||||||| ||| ||| ||||| || || || || || || | Sbjct 1448138 TTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGCTGGACTCGACCTCAAG 1448197 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| |||||||| || Sbjct 1448198 AGTGATGGTCTTGCCGGT 1448215 >seq8 Length=1820348 Score = 111 bits (122), Expect = 4e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || ||| | ||||| || |||||||| ||||||||||| Sbjct 642764 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 642705 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || |||||||| || || ||||| |||||||| |||||||| ||| || ||| Sbjct 642704 AGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 642645 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || ||||| | || || ||||| ||||||| || || | ||| Sbjct 642644 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 642586 >seq2 Length=3417088 Score = 86.0 bits (94), Expect = 1e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || || || |||| ||||| || | | || | || || Sbjct 664636 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGACCGTCC 664695 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || |||||||| || || ||||| ||||||||| Sbjct 664696 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCT 664755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530436034700