Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq8 143 4e-29 seq3 109 8e-19 >seq8 Length=1820348 Score = 143 bits (158), Expect = 4e-29 Identities = 499/774 (64%), Gaps = 6/774 (1%) Strand=Plus/Minus Query 77759 GATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAA 77818 ||| || ||||| || | ||||||||||| || || || | |||||| || || || || Sbjct 1046215 GATGGTACCCAGGTTCTTCTGGTTGCTCTTCTTGTTACAAGCGTCCTTGTAGAGCATGAA 1046156 Query 77819 CGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG-CTTTTA 77877 || | || || || |||| | |||| || | | ||| | | ||| | | || | Sbjct 1046155 GGGGTTACCAGTCTCGGTCTGAGCCTCGAGGATGGCATACCACA-GCTTCTGGGCCTTAA 1046097 Query 77878 TCATAGATTTGTATCGCCTCTCTCTTTCATATTGA--GTATATAGCCGTTCAAATTCATC 77935 | | || | || | ||| | ||||| | ||| | |||| || || || || Sbjct 1046096 TGGTGGAGCGGCCGCGGCCCTCCTTCTCATAACGCTCGTAGAGAGCC--TCGAACTCGTC 1046039 Query 77936 TCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATC 77995 || | |||||| | | || ||| || || ||||| | | | |||||| |||| Sbjct 1046038 GCCGTAGACATCAGCAAGGCCGGGGGCCTCGTTGGGGCAGAATAGAGTCCAGTCTCCATT 1045979 Query 77996 TTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGT 78055 || || || ||||| || ||||| || |||| || ||| || || || |||| Sbjct 1045978 GGACTCGACACGCTTCATGAACAGATCGGGGGTCCACAGGGCATAGAACAGGTCACGGGC 1045919 Query 78056 TCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATG 78115 | ||| || || || ||||| || ||||| ||||| | | ||| | || Sbjct 1045918 ACGGATTTCCTCCTTACCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGACATCCGCGTG 1045859 Query 78116 CCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATA 78175 |||||| || || || || || | | || || || || || || ||||| || | ||| Sbjct 1045858 CCATGGCTCAAGGTAGATGGCAAAGGCACCGGGACGCTTGTTTCCACCCTGGTCGACATA 1045799 Query 78176 TCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGT 78235 | ||| ||||| || || || | | ||| || | ||||||||| || || || || || Sbjct 1045798 GCGGGCTGTGTTGTTGTACACGCGGAGCATGGGGACAATACCGTTCGAGGTACCGTTAGT 1045739 Query 78236 TCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGC 78295 ||| ||| ||| ||| | |||||||| ||| | || || || || || Sbjct 1045738 TCCGCCAATGTAAGAGCCAGTCGCGCGAATGCGGTGGATGTTCAGACCAATACCACCAGC 1045679 Query 78296 CATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATC 78355 |||| || || | || || ||||| ||||||||||||||||| || ||||| || Sbjct 1045678 AGTCTTTGAGATCATGGCACAGGTCTTCAAAGTATCGTAGATACCCTCAATGCTGTCCTC 1045619 Query 78356 CATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAA 78415 | |||| | || || || || | || ||| | || || || || || || | Sbjct 1045618 CTTCATATCAACCAGGAAGCAAGAGGCCAGTTGGGGCTGGGGGGTACCAGCGTTGAACAG 1045559 Query 78416 TGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGA 78475 || ||||| || || || || | |||| ||| | | | ||| || ||||| || Sbjct 1045558 GGTTGGAGAAGCGTGAGTGAAGTACTTTTGAGACATCAAGTGGTAGGTCTCAATGGCCTT 1045499 Query 78476 TTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGG 78529 || || ||| | ||||| || || || |||||||||| || |||||||| Sbjct 1045498 CTCAATATCCTCTCCGTGAATACCAACAGCAACACGCATCAGCAGGTGCTGAGG 1045445 >seq3 Length=2521181 Score = 109 bits (120), Expect = 8e-19 Identities = 246/369 (67%), Gaps = 3/369 (1%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 |||||||| || || ||||||||||| || ||||| || |||||||| || || | ||| Sbjct 1109192 TCGTTAGAGAAGGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCG 1109133 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 ||||| ||||| ||||| || || || ||||| || || || || | | | Sbjct 1109132 AAAGAGCCAGAGAAGAAGATACCCTCGACGGCAGCGAAGGCAACGAGACGGGAAGCAAAG 1109073 Query 48303 CTGGCTTC---GTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 | | || || || ||||| || |||||||| ||||| ||| | || || Sbjct 1109072 GTAGAATCACGGTCTTGGATCCAGCGGATGGCCCAATCGGCCTTGCGCTTGATGCAGGGA 1109013 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCT 48419 || ||||| || |||| ||||| || | || ||| || || | ||| ||||| Sbjct 1109012 ATGGTTTCAATGGCATCGAAGAGGTAGGTGCGTTGCTTGGGCTCCTTGATGTAGGTATCG 1108953 Query 48420 ATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAA 48479 || | ||| || | |||||||| ||||| || || ||||| || || || || Sbjct 1108952 ATAAGAAGGGAGTAGGTCTCGGAGTGGATATTCTCCATCATAATCTGGAAACCATAGAAG 1108893 Query 48480 CATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACT 48539 || | || || |||| ||| ||||| | | || || ||| | | |||||||| || Sbjct 1108892 CAGCGAGCCTCAGTGACCTGGACCTCAGCGCTGAAACGCTCAACAAGGTTCTCATTGACA 1108833 Query 48540 ATTCCATCA 48548 || || ||| Sbjct 1108832 ATGCCGTCA 1108824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668365832000