Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09]
50 sequences; 33,998,198 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq8 143 4e-29
seq3 109 8e-19
>seq8
Length=1820348
Score = 143 bits (158), Expect = 4e-29
Identities = 499/774 (64%), Gaps = 6/774 (1%)
Strand=Plus/Minus
Query 77759 GATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAA 77818
||| || ||||| || | ||||||||||| || || || | |||||| || || || ||
Sbjct 1046215 GATGGTACCCAGGTTCTTCTGGTTGCTCTTCTTGTTACAAGCGTCCTTGTAGAGCATGAA 1046156
Query 77819 CGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG-CTTTTA 77877
|| | || || || |||| | |||| || | | ||| | | ||| | | || |
Sbjct 1046155 GGGGTTACCAGTCTCGGTCTGAGCCTCGAGGATGGCATACCACA-GCTTCTGGGCCTTAA 1046097
Query 77878 TCATAGATTTGTATCGCCTCTCTCTTTCATATTGA--GTATATAGCCGTTCAAATTCATC 77935
| | || | || | ||| | ||||| | ||| | |||| || || || ||
Sbjct 1046096 TGGTGGAGCGGCCGCGGCCCTCCTTCTCATAACGCTCGTAGAGAGCC--TCGAACTCGTC 1046039
Query 77936 TCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATC 77995
|| | |||||| | | || ||| || || ||||| | | | |||||| ||||
Sbjct 1046038 GCCGTAGACATCAGCAAGGCCGGGGGCCTCGTTGGGGCAGAATAGAGTCCAGTCTCCATT 1045979
Query 77996 TTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGT 78055
|| || || ||||| || ||||| || |||| || ||| || || || ||||
Sbjct 1045978 GGACTCGACACGCTTCATGAACAGATCGGGGGTCCACAGGGCATAGAACAGGTCACGGGC 1045919
Query 78056 TCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATG 78115
| ||| || || || ||||| || ||||| ||||| | | ||| | ||
Sbjct 1045918 ACGGATTTCCTCCTTACCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGACATCCGCGTG 1045859
Query 78116 CCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATA 78175
|||||| || || || || || | | || || || || || || ||||| || | |||
Sbjct 1045858 CCATGGCTCAAGGTAGATGGCAAAGGCACCGGGACGCTTGTTTCCACCCTGGTCGACATA 1045799
Query 78176 TCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGT 78235
| ||| ||||| || || || | | ||| || | ||||||||| || || || || ||
Sbjct 1045798 GCGGGCTGTGTTGTTGTACACGCGGAGCATGGGGACAATACCGTTCGAGGTACCGTTAGT 1045739
Query 78236 TCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGC 78295
||| ||| ||| ||| | |||||||| ||| | || || || || ||
Sbjct 1045738 TCCGCCAATGTAAGAGCCAGTCGCGCGAATGCGGTGGATGTTCAGACCAATACCACCAGC 1045679
Query 78296 CATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATC 78355
|||| || || | || || ||||| ||||||||||||||||| || ||||| ||
Sbjct 1045678 AGTCTTTGAGATCATGGCACAGGTCTTCAAAGTATCGTAGATACCCTCAATGCTGTCCTC 1045619
Query 78356 CATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAA 78415
| |||| | || || || || | || ||| | || || || || || || |
Sbjct 1045618 CTTCATATCAACCAGGAAGCAAGAGGCCAGTTGGGGCTGGGGGGTACCAGCGTTGAACAG 1045559
Query 78416 TGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGA 78475
|| ||||| || || || || | |||| ||| | | | ||| || ||||| ||
Sbjct 1045558 GGTTGGAGAAGCGTGAGTGAAGTACTTTTGAGACATCAAGTGGTAGGTCTCAATGGCCTT 1045499
Query 78476 TTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGG 78529
|| || ||| | ||||| || || || |||||||||| || ||||||||
Sbjct 1045498 CTCAATATCCTCTCCGTGAATACCAACAGCAACACGCATCAGCAGGTGCTGAGG 1045445
>seq3
Length=2521181
Score = 109 bits (120), Expect = 8e-19
Identities = 246/369 (67%), Gaps = 3/369 (1%)
Strand=Plus/Minus
Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242
|||||||| || || ||||||||||| || ||||| || |||||||| || || | |||
Sbjct 1109192 TCGTTAGAGAAGGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCG 1109133
Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302
||||| ||||| ||||| || || || ||||| || || || || | | |
Sbjct 1109132 AAAGAGCCAGAGAAGAAGATACCCTCGACGGCAGCGAAGGCAACGAGACGGGAAGCAAAG 1109073
Query 48303 CTGGCTTC---GTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359
| | || || || ||||| || |||||||| ||||| ||| | || ||
Sbjct 1109072 GTAGAATCACGGTCTTGGATCCAGCGGATGGCCCAATCGGCCTTGCGCTTGATGCAGGGA 1109013
Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCT 48419
|| ||||| || |||| ||||| || | || ||| || || | ||| |||||
Sbjct 1109012 ATGGTTTCAATGGCATCGAAGAGGTAGGTGCGTTGCTTGGGCTCCTTGATGTAGGTATCG 1108953
Query 48420 ATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAA 48479
|| | ||| || | |||||||| ||||| || || ||||| || || || ||
Sbjct 1108952 ATAAGAAGGGAGTAGGTCTCGGAGTGGATATTCTCCATCATAATCTGGAAACCATAGAAG 1108893
Query 48480 CATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACT 48539
|| | || || |||| ||| ||||| | | || || ||| | | |||||||| ||
Sbjct 1108892 CAGCGAGCCTCAGTGACCTGGACCTCAGCGCTGAAACGCTCAACAAGGTTCTCATTGACA 1108833
Query 48540 ATTCCATCA 48548
|| || |||
Sbjct 1108832 ATGCCGTCA 1108824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668365832000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |