Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09] 50 sequences; 33,998,198 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq7 132 1e-25 seq8 114 3e-20 >seq7 Length=2000612 Score = 132 bits (146), Expect = 1e-25 Identities = 149/198 (75%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || | || || || || |||||||| ||||| || | |||||||||| Sbjct 1447928 TCGTCAAGACCTTGACCGGCAAGACTATCACCCTTGAGGTTGAGTCCAGCGACACCATCG 1447869 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | |||||||| ||||||||||| || || || |||||||| ||||| || || || | Sbjct 1447868 ATAACGTCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAACAGCGTCTCA 1447809 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||||||| ||||||||||| || ||||| | || || |||| || || |||| |||| Sbjct 1447808 TCTTCGCTGGAAAACAGCTTGAGGATGGCCGTACCCTGTCCGACTACAATATCCAGAAAG 1447749 Query 178111 AATCAACACTGCATCTTG 178128 |||| || || || |||| Sbjct 1447748 AATCTACCCTTCA-CTTG 1447732 >seq8 Length=1820348 Score = 114 bits (126), Expect = 3e-20 Identities = 136/183 (74%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 642585 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC---GACAC 642641 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || ||||| || ||||| || || Sbjct 642642 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAACAGCG 642701 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || |||||||| || || |||||||| ||||| | ||||| ||| || ||| |||| Sbjct 642702 CCTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCA 642761 Query 178106 AAA 178108 || Sbjct 642762 GAA 642764 Score = 93.3 bits (102), Expect = 1e-13 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 214252 CCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATCATCAAGA 214311 ||||| || || || || || |||| ||| || || |||||||||||| |||| Sbjct 1046079 CCCTCCTTCTCATAACGCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCAAGG 1046020 Query 214312 CCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCTTTTCATG 214371 ||||| ||||||||||||||||| ||| |||| | |||||| | ||| | |||||| Sbjct 1046019 CCGGGGGCCTCGTTGGGGCAGAATAGAGTCCAGTCTCCATTGGACTCGACACGCTTCATG 1045960 Query 214372 AAAAGGTCGGAAGTCCAGATTGCATAAAA 214400 || || |||| ||||| | ||||| || Sbjct 1045959 AACAGATCGGGGGTCCACAGGGCATAGAA 1045931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730428859700