Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001950535.1_202016-12-09]
50 sequences; 33,998,198 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq7 138 1e-27
seq8 134 1e-26
seq2 105 6e-18
>seq7
Length=2000612
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||||| || || ||| ||||||||| ||||| || || ||
Sbjct 1447256 CCACCCCGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAA 1447315
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || |||||||| || || || || || ||||||||||| | ||||
Sbjct 1447316 AGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGGGGA 1447375
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| ||| || |||| ||| | | | |||||| ||||||||
Sbjct 1447376 ATACCCTCCTTGTCCTGGATCTTGCTCTTC-ACGTTGTCGATTGTGTCGGAGGACTCCAC 1447434
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| || || || || || |||| ||||| ||||| ||||||||
Sbjct 1447435 TTCCAATGTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 1447482
Score = 113 bits (124), Expect = 4e-20
Identities = 149/205 (73%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||||| || || ||| |||||||||||||||||||||||
Sbjct 1448013 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAA 1448072
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || | |||||| || ||||| ||||| ||||||||||| | ||
Sbjct 1448073 AGGGTGCGGCCATCCTCCAACTGCTTTCCAGCGAAAATCAGACGCTGTTGGTCAGGAGGG 1448132
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813
| || ||||||||| ||| || ||| || | || | ||| ||||| ||||| |
Sbjct 1448133 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATAGTATCGCTGGACTCGA 1448190
Query 41814 CCTCCACCGTTATCGTTTTACCCGT 41838
|||| | || || || || || ||
Sbjct 1448191 CCTCAAGAGTGATGGTCTTGCCGGT 1448215
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| |||| || ||||||||| ||||| ||||||||
Sbjct 1447484 CCACCACGAAGACGGAGAACCAAGTGCAATGTAGACTCCTTCTGGATGTTGTAGTCGGAA 1447543
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || || |||||||||||||| || || || |||||||| | |||
Sbjct 1447544 AGGGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAAATTAGACGTTGTTGGTCAGGGGGG 1447603
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGACTCCAC 41814
| | |||||| || ||| || ||||| | | | | ||||| || || ||
Sbjct 1447604 ATACCCTCCTTATCTTGGATCTTGCTCTTCACATTATCA-ATCGTGTCTGATGATTCAAC 1447662
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| || || || || || || || ||||| || || ||||||||
Sbjct 1447663 CTCCAAAGTGATAGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 1447710
Score = 89.7 bits (98), Expect = 5e-13
Identities = 152/218 (70%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || || || ||||| || || ||||||||
Sbjct 1447712 CCACCACGCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATATTGTAGTCGGAC 1447771
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || | || || ||||| || || ||||| || || ||||||||||| | ||
Sbjct 1447772 AGGGTACGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGTTGGTCAGGAGGG 1447831
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||| ||| ||| | || | | ||| | | |||||||| ||||| ||
Sbjct 1447832 ATGCCCTCCTTATCC-TGAATCTTGGACTTGACGTTATCGATGGTGTCGCTGGACTCAAC 1447890
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852
||| | || || || || || |||| ||||| ||||
Sbjct 1447891 CTCAAGGGTGATAGTCTTGCCGGTCAAGGTCTTGACGA 1447928
>seq8
Length=1820348
Score = 134 bits (148), Expect = 1e-26
Identities = 141/183 (77%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||| || ||||| | || |||||||||||||| ||||| |
Sbjct 642766 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 642707
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792
|||||||||||||||| | ||| | | |||||||||| ||| || ||| ||| |
Sbjct 642706 TCAGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTT-GACGTTG 642648
Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851
| | |||||||||||||| || || | || || || ||||||||||| ||||| |||
Sbjct 642647 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 642588
Query 41852 AAA 41854
|||
Sbjct 642587 AAA 642585
>seq2
Length=3417088
Score = 105 bits (116), Expect = 6e-18
Identities = 108/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || || || | || || || || || ||||||||| ||||| |||||
Sbjct 664617 ACCACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTC 664676
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
|||||||| || |||| ||||||||||| || ||||| ||||| ||||||||||| |
Sbjct 664677 CGAGAGGGTACGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCAGG 664736
Query 41752 GGGAACGCTCTCCTTGTCCAT 41772
||| | | ||||||||| ||
Sbjct 664737 GGGGATACCCTCCTTGTCTAT 664757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303711060000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |