Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq12 118 1e-21 seq2 98.7 1e-15 >seq12 Length=999707 Score = 118 bits (130), Expect = 1e-21 Identities = 542/845 (64%), Gaps = 20/845 (2%) Strand=Plus/Minus Query 54010 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAA 54068 ||| || |||| ||| || || ||||| || ||||| || |||| | ||| || || Sbjct 267767 CCAGTCACCGTTGGCCTCAACGCGCTTCATGAAAAGATCGGGGGTCCACAAAGCGTAGAA 267708 Query 54069 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 54128 | || || | || | | ||||| || || ||||| | |||||||||| | | Sbjct 267707 A-AGGTCACGGGCGCGAACCTCCTCCTTACCATGGTTCTTGCGCAAATCGAGGAACTCGA 267649 Query 54129 TAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTC 54188 | ||||| |||||||| |||| ||| |||| | | ||||| || || || || | Sbjct 267648 AGACATCAGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCAGGGCGCTTATTACCAC 267589 Query 54189 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 54248 |||| || | || | |||||||||||| | || | || ||| |||| |||||| |||| Sbjct 267588 CCTGGTCCACATAGCGGGCGGTGTTATTAAACACACGCAGCATAGGAACAATACCGTTGG 267529 Query 54249 ATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATAT--TACTAATTGATAG 54306 | | || || || || ||| || ||| | || ||||| | ||| | | Sbjct 267528 AGGAGCCGTTAGTTCCACCGATGTAAGAACCAGTAGCGCGAATGCGGTGGACATTCA--G 267471 Query 54307 ACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC-GTATCATAGATGC 54365 ||| || || || || | || || || | || || || |||| ||||||||||| | Sbjct 267470 ACCGATACCACCGGCGGTCTTGGAAATCATGGCACAG-GTCTTAAGAGTATCATAGATAC 267412 Query 54366 CCTCTATACTATCATCCATCATGTTAAGTAGAAAACA----GCTAGACATTTGGTGACGA 54421 | || || || || | |||||| || || || || || || | | || || Sbjct 267411 CTTCAATGCTGTCCGCGCTCATGTCAACCAGGAAGCAAGATGCAAG-CTGAGGTTGGGGA 267353 Query 54422 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 54481 ||| | ||||| || | || ||||| || || || || | |||| || | | | Sbjct 267352 GTAG---CGGCATTGAACAGAGTGGGAGAGGCATGGGTGAAGAACTTTTGGGACATCAAA 267296 Query 54482 TTGTACGTCTCGATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCAT 54540 | ||| ||||| || || || |||||| || | || ||||| || || |||||||| Sbjct 267295 TGGTATGTCTCAATGGCCTTTTCAATATCCTCACCG-TGGATTCCGACAGCAACACGCAT 267237 Query 54541 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTC 54600 || || |||||| || | ||| | | || ||| ||| || | ||| || || Sbjct 267236 TAGCAAGTGCTGGGGACGCTCAGCAACATTACCGTTAATTCGAAGAAGGTATGAACGCTC 267177 Query 54601 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTT 54660 | || || || || || ||||||| ||||| || ||||| | ||| | ||||| Sbjct 267176 GAGTGTCTTGAACCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGAGTT 267117 Query 54661 GAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACT-TGAAATAATCGGAGAAT 54719 || | || || || |||| | | | | || | || ||| || || |||| | Sbjct 267116 CAGCTCCTCAGCATGCTTCATAACAATCT-CGTAGTGCTCCTGTGAGATCATAGGAGCAG 267058 Query 54720 GTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtt 54779 | || || || || || ||||||| | | ||| || || ||| ||| Sbjct 267057 GCTTATTGTTCTTGGGGTTCACATAGTGGTAGAGATCAGAGATGACCATGGAGAATTGTT 266998 Query 54780 tttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCG 54839 | || |||| ||||| || || || ||||| || | || || | ||||||||| || | Sbjct 266997 TCTTGGTTTGCTTGTGAAGGTTCGAAACGGCGATACGTGCAGCCAAAATGGCATAGTCGG 266938 Query 54840 GATGT 54844 | ||| Sbjct 266937 GGTGT 266933 >seq2 Length=3132020 Score = 98.7 bits (108), Expect = 1e-15 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| || || ||||| || ||| || |||||||| | | || | || ||||| Sbjct 933548 AACAACAGGCAAGCGAAGTCAGTGTGGAGGCCCTCGTCACGAGAGATCAGCTCATTGGAG 933489 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || ||||| |||||||| ||||||||||| || | ||| || ||||| || || || ||| Sbjct 933488 AAGGTGAGACCGGGCATGAGGCCACGCTTCTTCAACCAGAAGATGGAGGCGAAGGAGCCA 933429 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 24279 || ||||| || || || || || || ||||||| Sbjct 933428 GAGAAGAAGATACCCTCGACAGCAGCGAAGGCAA 933395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720924641680