Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 >seq1 Length=5488300 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| |||| ||||||||| ||||||||||| ||||| | | Sbjct 207379 CCACCACGTAGACGGAGAACCAAGTGCAGAGTGGACTCTTTTTGAATGTTGTAGTCGGAC 207438 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||||||||| ||||| || | ||||| | ||||||||| ||| Sbjct 207439 AGAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGGGGA 207498 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| || || | | ||| || ||| | ||| Sbjct 207499 ATGCCCTCCTTGTCCTGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCGACC 207558 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGAC 21163 || | ||| |||||||| || || | || ||||| Sbjct 207559 TCAAGGGTGATGGTCTTTCCAGTCAGGGTCTTGAC 207593 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | |||||||||||| || || |||||||| | Sbjct 207660 CCGCCACGAAGGCGGAGGACCAGGTGAAGAGTGGACTCCTTCTGGATATTATAGTCGGAA 207719 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||| ||||| ||||| ||| | || | | ||||||||| || Sbjct 207720 AGCGTGCGACCATCCTCAAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGG 207779 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| ||||| || |||||| || || | | ||| ||||| | || |||| Sbjct 207780 ATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCGATGGTATCGCTGGACTCCACC 207839 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | ||| ||||||||||| || Sbjct 207840 TCAAGGGTGATGGTCTTGCCAGT 207862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258731688156