Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1 122 8e-23 seq7 102 7e-17 seq5 93.3 4e-14 >seq1 Length=5488300 Score = 122 bits (134), Expect = 8e-23 Identities = 157/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA-- 118583 |||||||| ||| | || ||| || || |||||||| || | |||| ||| Sbjct 206937 CAACACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCG--AAAGTGTACGTCCG 206994 Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||| ||||| || |||||| |||| ||||||||||| || ||||| || ||||||||| Sbjct 206995 TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGGATACCCTCCTTG 207054 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || ||| || || || | || | |||||| | |||||| ||||||| || | Sbjct 207055 TCCTGAATCTTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCGAGCGTGATG 207114 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || ||||||| ||| || |||||||| ||||| Sbjct 207115 GTCTTTCCGGTCAAAGTCTTGACAAAAATTTGCAT 207149 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || |||||||||||||||||||| ||| || ||| || ||||| Sbjct 207397 ACCAAGTGCAGAGTGGACTCTTTTTGAATGTTGTAGTCGGACAGAGTACGTCCGTCCTCC 207456 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| |||| || |||||||| || || || |||||||||||||| | Sbjct 207457 AGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGA 207516 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || ||||| | |||| |||||| | ||||||||| | ||| | || || Sbjct 207517 ATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCGACCTCAAGGGTGATGGTCTTT 207576 Query 118710 CCGGTCAGAGTTTTTAC 118726 || ||||| || || || Sbjct 207577 CCAGTCAGGGTCTTGAC 207593 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| ||| || || || || || ||||||||| | || || ||| || ||||| Sbjct 207174 GTGGAGTGTGGATTCCTTCTGGATATTGTAATCGGAAAGTGTACGGCCATCTTCAAGCTG 207233 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||| || |||||||||||||| || ||||||||||| ||| |||||| Sbjct 207234 CTTGCCTGCGAAGATAAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTATCTTGAATTTT 207293 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||||| | |||||| |||| || | || |||||||| Sbjct 207294 GGACTTCACATTATCGATAGTGTCGGACGACTCGACTTCGAGTGTGATAGTCTTGCCGGT 207353 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || || ||||||||||| Sbjct 207354 GAGTGTCTTAACGAAAATCTGCAT 207377 >seq7 Length=1586650 Score = 102 bits (112), Expect = 7e-17 Identities = 134/182 (74%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||||||| ||||| |||||||||||| || || ||| |||| Sbjct 836225 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 836284 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTT 118668 || |||||||| || || || ||||||||||| | ||| | | || || || || | | Sbjct 836285 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGA--TCTTGGTCTTGACGTTGT 836342 Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728 ||| |||||| | |||||| |||| ||| | || || || ||||| || || || | Sbjct 836343 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 836402 Query 118729 AA 118730 || Sbjct 836403 AA 836404 >seq5 Length=2122312 Score = 93.3 bits (102), Expect = 4e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || ||||||||||| | |||||| |||||||||||| || ||| Sbjct 1613503 GTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCA 1613562 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 ||| |||| || |||||||| || || || || ||||||||||||| Sbjct 1613563 GCGAAGATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCTG 1613608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829918854972