Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1 107 1e-18 >seq1 Length=5488300 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| || ||||| ||||| || |||| | || || | ||||||||||||||| Sbjct 207186 TTCCTTCTGGATATTGTAATCGGAAAGTGTACGGCCATCTTCAAGCTGCTTGCCTGCGAA 207245 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || || |||||||| ||| ||| | || |||||| || || || ||| | || Sbjct 207246 GATAAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTATCTTGAATTTTGGACTTCACATT 207305 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | |||| ||| ||||| || | ||||| || ||||||||||| || || || Sbjct 207306 ATCGATAGTGTCGGACGACTCGACTTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTAAC 207365 Query 34378 AAAGATCTGCAT 34389 || |||||||| Sbjct 207366 GAAAATCTGCAT 207377 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || ||||||||| | || || || ||||| ||||||||||| || Sbjct 206923 CCACCACGCAGACGCAACACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 206982 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| |||| |||||| || ||||| || || ||||||||||| || Sbjct 206983 AGTGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGG 207042 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | || | || | || || Sbjct 207043 ATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACC 207102 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||||||| || ||||| | ||| || ||||| || ||||| Sbjct 207103 TCGAGCGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAAATTTGCAT 207149 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||| | ||| ||||| || ||||||||||||||||| ||| |||| Sbjct 207394 AGAACCAAGTGCAGAGTGGACTCTTTTTGAATGTTGTAGTCGGACAGAGTACGTCCGTCC 207453 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| ||||||||| ||||| || || ||||||||||| ||| | || ||||||||| Sbjct 207454 TCCAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 207513 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | || | || ||||| || | |||||||| Sbjct 207514 TGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCGACCTCAAGGGTGATGGTC 207573 Query 34358 TTGCCGGTGAGAGTTTTCAC 34377 || || || || || || || Sbjct 207574 TTTCCAGTCAGGGTCTTGAC 207593 Score = 82.4 bits (90), Expect = 5e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || |||||||| | ||| || ||||| || || |||||||| Sbjct 207660 CCGCCACGAAGGCGGAGGACCAGGTGAAGAGTGGACTCCTTCTGGATATTATAGTCGGAA 207719 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| || | || || | ||||||||| || || || | ||||||||||| || Sbjct 207720 AGCGTGCGACCATCCTCAAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGG 207779 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||| || ||||| ||| | || | | || | |||| | || || || Sbjct 207780 ATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCGATGGTATCGCTGGACTCCACC 207839 Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367 || | |||||||| ||||| |||| Sbjct 207840 TCAAGGGTGATGGTCTTGCCAGTGA 207864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071641692960