Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq12 145 1e-29 seq2 102 1e-16 >seq12 Length=999707 Score = 145 bits (160), Expect = 1e-29 Identities = 548/845 (65%), Gaps = 20/845 (2%) Strand=Plus/Minus Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAA 63306 ||| || |||| ||| || || ||||| || ||||| || |||| | ||| || || Sbjct 267767 CCAGTCACCGTTGGCCTCAACGCGCTTCATGAAAAGATCGGGGGTCCACAAAGCGTAGAA 267708 Query 63307 ATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 63366 | || || | | | | ||||| || || ||||| | |||||||||| | | Sbjct 267707 A-AGGTCACGGGCGCGAACCTCCTCCTTACCATGGTTCTTGCGCAAATCGAGGAACTCGA 267649 Query 63367 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 63426 | ||||| |||||||| |||| ||| ||||| | | ||||| || || || || | Sbjct 267648 AGACATCAGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCAGGGCGCTTATTACCAC 267589 Query 63427 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTG 63486 |||| || | || | |||||||||||| | || | || ||| |||| ||||||||| | Sbjct 267588 CCTGGTCCACATAGCGGGCGGTGTTATTAAACACACGCAGCATAGGAACAATACCGTTGG 267529 Query 63487 ATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATAG 63544 | || || || || ||| || ||| | || ||||| | ||| || Sbjct 267528 AGGAGCCGTTAGTTCCACCGATGTAAGAACCAGTAGCGCGAATGCGGTGGACATT--CAG 267471 Query 63545 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGTCATAGATGC 63603 ||| || || || || | || || || | || || || |||| || |||||||| | Sbjct 267470 ACCGATACCACCGGCGGTCTTGGAAATCATGGCACA-GGTCTTAAGAGTATCATAGATAC 267412 Query 63604 CTTCTATGCTATCATCGATCATGTTAAGTAGAAAACA----GCTAGACATTTGGTGACGA 63659 |||| ||||| || || |||||| || || || || || || | | || || Sbjct 267411 CTTCAATGCTGTCCGCGCTCATGTCAACCAGGAAGCAAGATGCAAG-CTGAGGTTGGGGA 267353 Query 63660 GTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 63719 |||| | ||||| || | || ||||| || || || || | |||| || | | | Sbjct 267352 GTAG---CGGCATTGAACAGAGTGGGAGAGGCATGGGTGAAGAACTTTTGGGACATCAAA 267296 Query 63720 TTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCAT 63778 | ||| |||||||| || || |||||| || | || ||||| || || |||||||| Sbjct 267295 TGGTATGTCTCAATGGCCTTTTCAATATCCTCACCG-TGGATTCCGACAGCAACACGCAT 267237 Query 63779 TAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63838 || || |||||| || | ||| ||| || ||| ||| | | ||| || || Sbjct 267236 TAGCAAGTGCTGGGGACGCTCAGCAACATTACCGTTAATTCGAAGAAGGTATGAACGCTC 267177 Query 63839 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 63898 | || || || || || ||||||| ||||| || ||||| | ||| |||| || Sbjct 267176 GAGTGTCTTGAACCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGAGTT 267117 Query 63899 GAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACT-TGAAATAATCGGAGAAT 63957 |||| || || || |||| || | | | || | || ||| || || |||| | Sbjct 267116 CAGCTCCTCAGCATGCTTCATAACAATCT-CGTAGTGCTCCTGTGAGATCATAGGAGCAG 267058 Query 63958 GTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 64017 | || || || || || ||||||| | | | ||| || || ||| ||| Sbjct 267057 GCTTATTGTTCTTGGGGTTCACATAGTGGTAGAGATCAGAGATGACCATGGAGAATTGTT 266998 Query 64018 tttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCG 64077 | || |||| |||||| || || || | ||| || | || || | ||||||||| || | Sbjct 266997 TCTTGGTTTGCTTGTGAAGGTTCGAAACGGCGATACGTGCAGCCAAAATGGCATAGTCGG 266938 Query 64078 GATGT 64082 | ||| Sbjct 266937 GGTGT 266933 >seq2 Length=3132020 Score = 102 bits (112), Expect = 1e-16 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| || || ||||| || ||| || |||||||| | | || | || || || Sbjct 933548 AACAACAGGCAAGCGAAGTCAGTGTGGAGGCCCTCGTCACGAGAGATCAGCTCATTGGAG 933489 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || ||||| |||||||| ||||||||||| || | ||| || ||||| ||||| || || Sbjct 933488 AAGGTGAGACCGGGCATGAGGCCACGCTTCTTCAACCAGAAGATGGAGGCGAAGGAGCCA 933429 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33726 || |||||||| || || || ||||| ||||||| Sbjct 933428 GAGAAGAAGATACCCTCGACAGCAGCGAAGGCAA 933395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816883582480