Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03-
24] 91 sequences; 28,360,408 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq12 145 1e-29
seq2 102 1e-16
>seq12
Length=999707
Score = 145 bits (160), Expect = 1e-29
Identities = 548/845 (65%), Gaps = 20/845 (2%)
Strand=Plus/Minus
Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAA 63306
||| || |||| ||| || || ||||| || ||||| || |||| | ||| || ||
Sbjct 267767 CCAGTCACCGTTGGCCTCAACGCGCTTCATGAAAAGATCGGGGGTCCACAAAGCGTAGAA 267708
Query 63307 ATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 63366
| || || | | | | ||||| || || ||||| | |||||||||| | |
Sbjct 267707 A-AGGTCACGGGCGCGAACCTCCTCCTTACCATGGTTCTTGCGCAAATCGAGGAACTCGA 267649
Query 63367 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 63426
| ||||| |||||||| |||| ||| ||||| | | ||||| || || || || |
Sbjct 267648 AGACATCAGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCAGGGCGCTTATTACCAC 267589
Query 63427 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTG 63486
|||| || | || | |||||||||||| | || | || ||| |||| ||||||||| |
Sbjct 267588 CCTGGTCCACATAGCGGGCGGTGTTATTAAACACACGCAGCATAGGAACAATACCGTTGG 267529
Query 63487 ATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATAG 63544
| || || || || ||| || ||| | || ||||| | ||| ||
Sbjct 267528 AGGAGCCGTTAGTTCCACCGATGTAAGAACCAGTAGCGCGAATGCGGTGGACATT--CAG 267471
Query 63545 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGTCATAGATGC 63603
||| || || || || | || || || | || || || |||| || |||||||| |
Sbjct 267470 ACCGATACCACCGGCGGTCTTGGAAATCATGGCACA-GGTCTTAAGAGTATCATAGATAC 267412
Query 63604 CTTCTATGCTATCATCGATCATGTTAAGTAGAAAACA----GCTAGACATTTGGTGACGA 63659
|||| ||||| || || |||||| || || || || || || | | || ||
Sbjct 267411 CTTCAATGCTGTCCGCGCTCATGTCAACCAGGAAGCAAGATGCAAG-CTGAGGTTGGGGA 267353
Query 63660 GTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 63719
|||| | ||||| || | || ||||| || || || || | |||| || | | |
Sbjct 267352 GTAG---CGGCATTGAACAGAGTGGGAGAGGCATGGGTGAAGAACTTTTGGGACATCAAA 267296
Query 63720 TTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCAT 63778
| ||| |||||||| || || |||||| || | || ||||| || || ||||||||
Sbjct 267295 TGGTATGTCTCAATGGCCTTTTCAATATCCTCACCG-TGGATTCCGACAGCAACACGCAT 267237
Query 63779 TAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63838
|| || |||||| || | ||| ||| || ||| ||| | | ||| || ||
Sbjct 267236 TAGCAAGTGCTGGGGACGCTCAGCAACATTACCGTTAATTCGAAGAAGGTATGAACGCTC 267177
Query 63839 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 63898
| || || || || || ||||||| ||||| || ||||| | ||| |||| ||
Sbjct 267176 GAGTGTCTTGAACCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGAGTT 267117
Query 63899 GAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACT-TGAAATAATCGGAGAAT 63957
|||| || || || |||| || | | | || | || ||| || || |||| |
Sbjct 267116 CAGCTCCTCAGCATGCTTCATAACAATCT-CGTAGTGCTCCTGTGAGATCATAGGAGCAG 267058
Query 63958 GTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 64017
| || || || || || ||||||| | | | ||| || || ||| |||
Sbjct 267057 GCTTATTGTTCTTGGGGTTCACATAGTGGTAGAGATCAGAGATGACCATGGAGAATTGTT 266998
Query 64018 tttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCG 64077
| || |||| |||||| || || || | ||| || | || || | ||||||||| || |
Sbjct 266997 TCTTGGTTTGCTTGTGAAGGTTCGAAACGGCGATACGTGCAGCCAAAATGGCATAGTCGG 266938
Query 64078 GATGT 64082
| |||
Sbjct 266937 GGTGT 266933
>seq2
Length=3132020
Score = 102 bits (112), Expect = 1e-16
Identities = 115/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632
|||| || || ||||| || ||| || |||||||| | | || | || || ||
Sbjct 933548 AACAACAGGCAAGCGAAGTCAGTGTGGAGGCCCTCGTCACGAGAGATCAGCTCATTGGAG 933489
Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692
|| ||||| |||||||| ||||||||||| || | ||| || ||||| ||||| || ||
Sbjct 933488 AAGGTGAGACCGGGCATGAGGCCACGCTTCTTCAACCAGAAGATGGAGGCGAAGGAGCCA 933429
Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33726
|| |||||||| || || || ||||| |||||||
Sbjct 933428 GAGAAGAAGATACCCTCGACAGCAGCGAAGGCAA 933395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816883582480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |