Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03-
24] 91 sequences; 28,360,408 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 6e-17
>seq1
Length=5488300
Score = 102 bits (112), Expect = 6e-17
Identities = 166/231 (72%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
||| |||||||| | ||||||| || | ||||||||||| || | ||||| || ||
Sbjct 206922 GCCACCACGCAGACGCAACACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 206981
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
| ||||||| |||| |||| || || || || || || | ||||| || || | ||
Sbjct 206982 AAGTGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGG 207041
Query 43002 CACACCTTCTTTTTCGCTG-ATC-AACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTC 43058
| ||| || || || ||| ||| ||| ||||| || ||| ||||| ||| |||
Sbjct 207042 GATACCCTCCTTGTC-CTGAATCTTGCTC-TTGACGTTGTCAATGGTGTC-TGAGCTCTC 207098
Query 43059 GACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| || | ||| || || |||||||| | ||| || ||||||||||||||
Sbjct 207099 AACCTCGAGCGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAAATTTGCAT 207149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381369177037278
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |