Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq12 141 1e-28 seq2 93.3 6e-14 >seq12 Length=999707 Score = 141 bits (156), Expect = 1e-28 Identities = 536/826 (65%), Gaps = 20/826 (2%) Strand=Plus/Minus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATG 72080 || || ||||| || ||||| || |||| | ||| || ||| || || | || | | Sbjct 267748 ACGCGCTTCATGAAAAGATCGGGGGTCCACAAAGCGTAGAAA-AGGTCACGGGCGCGAAC 267690 Query 72081 CTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 72140 |||||| || || ||||| | |||||||||| | | | ||||| |||||||| Sbjct 267689 CTCCTCCTTACCATGGTTCTTGCGCAAATCGAGGAACTCGAAGACATCAGCGTGCCACGG 267630 Query 72141 TTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 72200 |||| ||| ||||| | | || || || || || || ||||| || | || | || Sbjct 267629 CTCCAGGTAGATGGCAAAGGCACCAGGGCGCTTATTACCACCCTGGTCCACATAGCGGGC 267570 Query 72201 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGA 72260 |||||||||| | || | || ||| |||| |||||| ||||| | || || || || Sbjct 267569 GGTGTTATTAAACACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTAGTTCCACC 267510 Query 72261 GATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATT 72318 ||| || ||| | || ||||| || ||| ||||| || || || || | Sbjct 267509 GATGTAAGAACCAGTAGCGCGAATGCGGTGGACATT--CAGACCGATACCACCGGCGGTC 267452 Query 72319 TTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCCTCTATACTATCATCCAT 72377 || || || | || || || |||| ||||||||||| || || || || || | | Sbjct 267451 TTGGAAATCATGGCACA-GGTCTTAAGAGTATCATAGATACCTTCAATGCTGTCCGCGCT 267393 Query 72378 CATGTTAAGTAGAAAACA----GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATA 72433 ||||| || || || || || || | | || || ||| | ||||| || | Sbjct 267392 CATGTCAACCAGGAAGCAAGATGCAAG-CTGAGGTTGGGGAGTAG---CGGCATTGAACA 267337 Query 72434 AGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTG 72493 || ||||| || || || || | |||| |||| | || ||| |||||||| || Sbjct 267336 GAGTGGGAGAGGCATGGGTGAAGAACTTTTGGGACATCAAATGGTATGTCTCAATGGCCT 267277 Query 72494 ATTCTATATCC-CATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTT 72552 ||| |||||| || | || ||||| || || |||||||||| || ||||| || | Sbjct 267276 TTTCAATATCCTCACCG-TGGATTCCGACAGCAACACGCATTAGCAAGTGCTGGGGACGC 267218 Query 72553 TCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 72612 ||| | | || || ||| | | ||| || || | || || || || || Sbjct 267217 TCAGCAACATTACCGTTAATTCGAAGAAGGTATGAACGCTCGAGTGTCTTGAACCCGAAG 267158 Query 72613 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTG 72672 ||||||| ||||| || ||||| | ||| |||| || || | || || || Sbjct 267157 AAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGAGTTCAGCTCCTCAGCATGCTTC 267098 Query 72673 TTAACTATATCCATGGTGATACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATT 72731 |||| || | | | ||| | || ||| || || |||| | | || || || || || Sbjct 267097 ATAACAATCT-CGTAGTGCTCCTGTGAGATCATAGGAGCAGGCTTATTGTTCTTGGGGTT 267039 Query 72732 AACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAG 72791 ||||||| | | | ||| || || ||| |||| || |||| |||||| || Sbjct 267038 CACATAGTGGTAGAGATCAGAGATGACCATGGAGAATTGTTTCTTGGTTTGCTTGTGAAG 266979 Query 72792 ATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGT 72837 || || ||||| || | || || | ||||||||| || || ||| Sbjct 266978 GTTCGAAACGGCGATACGTGCAGCCAAAATGGCATAGTCGGGGTGT 266933 Score = 91.5 bits (100), Expect = 2e-13 Identities = 317/494 (64%), Gaps = 3/494 (1%) Strand=Plus/Minus Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848 |||| ||| | || ||||| ||||| | ||| ||||| | ||||| || ||||||||| Sbjct 268990 TCCTGGTCGACAGTGAACTGGATGGGGGCGGAGGCGGCCATGGTACGCAGGTAGTACATG 268931 Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTA 70908 || || || ||||| | |||| ||| || ||||| || || || ||| | | Sbjct 268930 CCGGTCTTCAGACCCATCTTCCAGCCGGCGAAGTGCATGCTGGTGAGCTTGCCCATGGTG 268871 Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968 || || | |||||| || | || || |||||||||||||| || | ||| || Sbjct 268870 GGCTCCTTCAAGTGAATGTTGAGGGATTGCGACTGATCGATGAAGGCACCGCGGTCGGCG 268811 Query 70969 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 71028 ||||| | | || | || | |||||||||| || || || | ||| ||| Sbjct 268810 GCCATCTGCAGAATGTTGCGCTGGGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGATA 268751 Query 71029 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTG 71085 || | || | ||| | ||||||| | ||| ||||| || || || || | || || Sbjct 268750 TCGGCGGGGATGTTGGGGATATTCTGGACGGAGCCACCCTCGGCGATGATGCGGTTCTTC 268691 Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACT 71145 || | ||| ||| | ||| | | | | ||||| ||| || || || Sbjct 268690 ATGTTATCAGACCACAGGCCGAGGTCGACCAGATCCTTCAGGAGCCAAGGGTTGACGACC 268631 Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205 || || || |||| || || | || | ||| || || ||| || || || | || Sbjct 268630 TGGAACTCACCAGCCAGGACACGGCGGGAGTAGATGTTCGAGGTGTAGGGCTCGAAGCAC 268571 Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTA 71265 || || |||| |||||| || ||||| ||||| || |||||||| ||||| Sbjct 268570 TCGTTGAAGCCCAGGATTTGACTGGTACTAGCAGTAGGCATGGGAGCCACCAACAGACTG 268511 Query 71266 TTTCTAAGACCATG 71279 || | | |||||| Sbjct 268510 TTGCGGACACCATG 268497 >seq2 Length=3132020 Score = 93.3 bits (102), Expect = 6e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| || || ||||| || ||| || ||||| || | | || | || ||||| Sbjct 933548 AACAACAGGCAAGCGAAGTCAGTGTGGAGGCCCTCGTCACGAGAGATCAGCTCATTGGAG 933489 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || ||||| |||||||| ||||||||||| || | ||| || || || || || || ||| Sbjct 933488 AAGGTGAGACCGGGCATGAGGCCACGCTTCTTCAACCAGAAGATGGAGGCGAAGGAGCCA 933429 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAA 42209 || |||||||| || || || || || ||||||| Sbjct 933428 GAGAAGAAGATACCCTCGACAGCAGCGAAGGCAA 933395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138436579160