Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq12 156 6e-33 seq2 154 2e-32 seq7 98.7 1e-15 >seq12 Length=999707 Score = 156 bits (172), Expect = 6e-33 Identities = 308/449 (69%), Gaps = 10/449 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| || ||||| || || || || | ||| ||||| |||| || |||||||| || Sbjct 267585 CAGGGTGGTAATAAGCGCCCTGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACGCTGAT 267644 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| ||||||| ||| ||| || |||| || ||| | ||| Sbjct 267645 GTCTTCGAGTTCCTCGATTTGCGCAAGAACCATGGTAAGGAGGAGGTTCGCGCCCGTGAC 267704 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA---CGACGGTGGC 97052 | || || || | ||| || ||| | |||||||||||||| | | |||||| Sbjct 267705 CTTTTCTACGCTTTGTGGACCCCCGATCTTTTCATGAAGCGCGTTGAGGCCAACGGTG-- 267762 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| ||| | |||||| || | | || || ||| | ||| || || || ||| Sbjct 267763 -ACTGGACCCTCTTCTGCCCCAACGAGGCTCCTGGCCTGGCTGATGTCTACGGTGATGAG 267821 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGC 97171 || |||||| ||| || |||||||| |||||||| ||| |||| | || | || Sbjct 267822 TTCGAGGCCCTCTACGCGAAGTACGAGCAGGAGGGCCGTGGCCGTAAGACTA-TCAAGGC 267880 Query 97172 ACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | |||| || ||| | ||||| | ||||||| |||||||| | |||| ||| | Sbjct 267881 -CCAGAAGCTTTGGTACGCCATTCTCGAGGCTCAGACCGAGACTGGTAACCCGTTCATGC 267939 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 ||||||||||| | || || |||||||| || |||| || || ||| Sbjct 267940 TCTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTGGGTACTATTCGCAGCT 267999 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTAC 97319 | || |||||||| || ||||| |||||| Sbjct 268000 CTAACCTGTGCACCGAGATTGTTGAGTAC 268028 >seq2 Length=3132020 Score = 154 bits (170), Expect = 2e-32 Identities = 299/435 (69%), Gaps = 21/435 (5%) Strand=Plus/Plus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 ||||| || ||||| || || ||||| |||||||| || || || || ||||||| Sbjct 933391 CTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGCTCCTTCGCCTCCATCTTC 933450 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||| | |||||||| || ||||||||||| || || | || ||| | || ||||| Sbjct 933451 TGGTTGAAGAAGCGTGGCCTCATGCCCGGTCTCACCTTCTCCAATGAGCTGATCTCTCGT 933510 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTGCGTCCC 125603 ||||||||||| ||| |||||| || || |||| || || | | | || ||| Sbjct 933511 GACGAGGGCCTCCACACTGACTTCGCTTGCCTGTTGTTCTCCCACATGAACCACCGCCCC 933570 Query 125604 GAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAA 125663 || || || | | ||| ||||| |||| ||| ||||| | || || Sbjct 933571 GACCCCA-----AG-GTCGTTCAGGACATCA---TTGT---CGAGGCCGTCGGCATCGAG 933618 Query 125664 CAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATG 125723 |||||||| || || || | || || | || || |||||||||||| |||| | ||| Sbjct 933619 CAAGAGTTCCTGACTGACGCTCTTCCTTGCGGCCTGCTTGGCATGAACTCCAAGTTGATG 933678 Query 125724 TGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA-- 125781 ||||||||||| ||||| || || ||||| || ||| | | | ||| ||||| Sbjct 933679 TGCGAGTACATCGAGTTCGTCGCTGATCGCCTGCTG---GTGGCCCTCGGCAACAAGAAG 933735 Query 125782 -TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACC 125840 ||||||||| || ||||| || |||||| ||| || || | || |||||| Sbjct 933736 TACTACAACGCCGTCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACC 933795 Query 125841 AACTTTTTCGAGAAG 125855 ||||| ||||||||| Sbjct 933796 AACTTCTTCGAGAAG 933810 >seq7 Length=1586650 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 70062 AAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATG 70121 |||| |||||||| || || |||||||||||||||||| |||||| ||| || |||||| Sbjct 266363 AAGAAGGCGATCTAGGACCCGTGTACGGATTCCAGTGGCGGCACTTTGGCGCCGAGTATG 266422 Query 70122 TAGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACA-ATCATTGAC 70180 | || | || |||| || | |||||||||||||| || | || | | | | || Sbjct 266423 TTGATGCCAAGGCAGATTACACCGGTCAGGGTGTTGACCAGCT-CAAAGATGTTGTGCAC 266481 Query 70181 ACTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGAT 70240 | |||| ||| || ||| | | ||| | ||| || | ||||| ||||| ||| Sbjct 266482 AAGCTCATTCACAACCCCTTCGATCGTCGCATCATCATGAGCGCGTGGAACCCTGCTGAT 266541 Query 70241 TTGCACCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTAC 70288 || | | ||||| || || |||||||| || || ||||| ||| Sbjct 266542 CTGAAAAAGATGGCTCTGCCCCCGTGTCATATGTTCGCCCAGTTCTAC 266589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058357045160