Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03-
24] 91 sequences; 28,360,408 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 2e-21
seq2 84.2 5e-11
>seq1
Length=5488300
Score = 118 bits (130), Expect = 2e-21
Identities = 130/173 (75%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| ||||||||||| || || || | ||| || || || || || |||
Sbjct 207690 GTGGACTCCTTCTGGATATTATAGTCGGAAAGCGTGCGACCATCCTCAAGCTGCTTGCCA 207749
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | | ||| || |||||||| || || || |||||||| ||||| | ||
Sbjct 207750 GCAAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTGGACTTG 207809
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535
||||| || | ||||||||| | || ||||| || || || ||||| |||||
Sbjct 207810 ACATTGTCGATGGTATCGCTGGACTCCACCTCAAGGGTGATGGTCTTGCCAGT 207862
Score = 91.5 bits (100), Expect = 3e-13
Identities = 139/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| ||||| || || ||||| || || || | ||||| || || || || ||||| ||
Sbjct 206959 TCCTTCTGGATGTTGTAGTCCGAAAGTGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAG 207018
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATT 104487
|| || | ||| || |||||||| || || || || ||||||||| ||||| || || ||
Sbjct 207019 ATAAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGAATC-TTGCTCTTGACGTT 207077
Query 104488 TTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTA 104546
|| | ||| || || | || ||||| || || || ||||| || || | || || |
Sbjct 207078 GTCAATGGTGTC-TGAGCTCTCAACCTCGAGCGTGATGGTCTTTCCGGTCAAAGTCTTGA 207136
Query 104547 CAAATATCTGCAT 104559
|||| || |||||
Sbjct 207137 CAAAAATTTGCAT 207149
Score = 91.5 bits (100), Expect = 3e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || ||||| ||||| || ||||| || ||||| | ||||| || || || || ||
Sbjct 207409 GTGGACTCTTTTTGAATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGCTTGCCG 207468
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||| || ||||| || || || || || ||||||||||| | ||
Sbjct 207469 GCGAAGATAAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTA 207528
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||| || | || ||||| || || || ||||| ||||| || ||
Sbjct 207529 ACGTTGTCGATGGTGTCAGATGACTCGACCTCAAGGGTGATGGTCTTTCCAGTCAGGGTC 207588
Query 104543 TTTAC 104547
|| ||
Sbjct 207589 TTGAC 207593
>seq2
Length=3132020
Score = 84.2 bits (92), Expect = 5e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197
||||| || || ||||| || ||||| ||||| || || || || ||| | ||||| |||
Sbjct 933394 GTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGCTCCTTCGCCTCCATCTTCTGG 933453
Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257
|||||||| | ||||| ||||| || | || ||||| || || |||| | |||
Sbjct 933454 TTGAAGAAGCGTGGCCTCATGCCCGGTCTCACCTTCTCCAATGAGCTGATCTCTCGTGAC 933513
Query 269258 GAAGGTTTACACTGCGACTTCGCTTG 269283
|| || | ||| |||||||||||
Sbjct 933514 GAGGGCCTCCACACTGACTTCGCTTG 933539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397057541428
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |