Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 118 2e-21 seq2 84.2 5e-11 >seq1 Length=5488300 Score = 118 bits (130), Expect = 2e-21 Identities = 130/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| ||||||||||| || || || | ||| || || || || || ||| Sbjct 207690 GTGGACTCCTTCTGGATATTATAGTCGGAAAGCGTGCGACCATCCTCAAGCTGCTTGCCA 207749 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | | ||| || |||||||| || || || |||||||| ||||| | || Sbjct 207750 GCAAAGATCAAACGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTGGACTTG 207809 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 ||||| || | ||||||||| | || ||||| || || || ||||| ||||| Sbjct 207810 ACATTGTCGATGGTATCGCTGGACTCCACCTCAAGGGTGATGGTCTTGCCAGT 207862 Score = 91.5 bits (100), Expect = 3e-13 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || || ||||| || || || | ||||| || || || || ||||| || Sbjct 206959 TCCTTCTGGATGTTGTAGTCCGAAAGTGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAG 207018 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATT 104487 || || | ||| || |||||||| || || || || ||||||||| ||||| || || || Sbjct 207019 ATAAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGAATC-TTGCTCTTGACGTT 207077 Query 104488 TTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTA 104546 || | ||| || || | || ||||| || || || ||||| || || | || || | Sbjct 207078 GTCAATGGTGTC-TGAGCTCTCAACCTCGAGCGTGATGGTCTTTCCGGTCAAAGTCTTGA 207136 Query 104547 CAAATATCTGCAT 104559 |||| || ||||| Sbjct 207137 CAAAAATTTGCAT 207149 Score = 91.5 bits (100), Expect = 3e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||| ||||| || ||||| || ||||| | ||||| || || || || || Sbjct 207409 GTGGACTCTTTTTGAATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGCTTGCCG 207468 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || ||||| || || || || || ||||||||||| | || Sbjct 207469 GCGAAGATAAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTA 207528 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| || | || ||||| || || || ||||| ||||| || || Sbjct 207529 ACGTTGTCGATGGTGTCAGATGACTCGACCTCAAGGGTGATGGTCTTTCCAGTCAGGGTC 207588 Query 104543 TTTAC 104547 || || Sbjct 207589 TTGAC 207593 >seq2 Length=3132020 Score = 84.2 bits (92), Expect = 5e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 ||||| || || ||||| || ||||| ||||| || || || || ||| | ||||| ||| Sbjct 933394 GTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGCTCCTTCGCCTCCATCTTCTGG 933453 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 |||||||| | ||||| ||||| || | || ||||| || || |||| | ||| Sbjct 933454 TTGAAGAAGCGTGGCCTCATGCCCGGTCTCACCTTCTCCAATGAGCTGATCTCTCGTGAC 933513 Query 269258 GAAGGTTTACACTGCGACTTCGCTTG 269283 || || | ||| ||||||||||| Sbjct 933514 GAGGGCCTCCACACTGACTTCGCTTG 933539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397057541428