Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1 102 7e-17 >seq1 Length=5488300 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTC 48573 ||||| | ||||| ||||||||||| || |||||||| || | || ||| || |||| Sbjct 206938 AACACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCG-AAAGTGTACGTCCGTC 206996 Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633 ||||||||||||||| || | || | ||||||||| || || | || |||||||| Sbjct 206997 CTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTC 207056 Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693 | ||| || ||||| | ||||| || | ||| ||||| || ||||| Sbjct 207057 CTGAATCTTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCGAGCGTGATGGT 207116 Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| | ||| || |||||||| ||||| Sbjct 207117 CTTTCCGGTCAAAGTCTTGACAAAAATTTGCAT 207149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250732806091