Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03-
24] 91 sequences; 28,360,408 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1 187 4e-43
>seq1
Length=5488300
Score = 187 bits (206), Expect = 4e-43
Identities = 200/262 (76%), Gaps = 2/262 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| ||||| || |||| ||||| | || || |||||||| || ||||||||||| || |
Sbjct 1652984 CGCCAAGCGCCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCCGCCA 1653042
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||||||||| ||||||||||| || ||||||||| |||||| || | || |||||||
Sbjct 1653043 TCCGTCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCTGCCATGATTTACGAAGAGA 1653102
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | ||| | ||| |||||| || | || |||| ||| ||| || || ||||
Sbjct 1653103 CCCGCGGTGTGCTCAAGTCCTTCCTTGAGTCTGTCATCCGTGACGCTGTCACATACACCG 1653162
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || |||||||||||||| || ||||| ||||||| || | || || || |
Sbjct 1653163 AGCACGCGAAGCGTAAGACTGTCACTTCTCTGGATGTCGTCTACGCCCTCAAGCGCCAGG 1653222
Query 16671 GCCGTAAGATTTATGGTTTTGG 16692
|||||| | || ||||| ||
Sbjct 1653223 GCCGTACCCTCTACGGTTTCGG 1653244
Score = 165 bits (182), Expect = 1e-36
Identities = 188/250 (75%), Gaps = 2/250 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| | | || || ||||| || ||||| |||||||| |||||
Sbjct 5035176 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATTCAGGGAATTACCAAGCCCGCTAT 5035118
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||||||| || || |||||||| ||||||||| |||| | || |||| || ||||
Sbjct 5035117 CCGTCGTCTCGCACGCCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAGGAGAC 5035058
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| | |||| ||||||| || || |||| ||| ||| | ||| || ||
Sbjct 5035057 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTTACCTACACTGA 5034998
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||||||||| || | || | ||||| || | || || || ||
Sbjct 5034997 GCACGCCAAGCGCAAGACTGTCACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 5034938
Query 16672 CCGTAAGATT 16681
||||||| ||
Sbjct 5034937 CCGTAAGTTT 5034928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075116798063
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |