Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1 187 4e-43 >seq1 Length=5488300 Score = 187 bits (206), Expect = 4e-43 Identities = 200/262 (76%), Gaps = 2/262 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || |||| ||||| | || || |||||||| || ||||||||||| || | Sbjct 1652984 CGCCAAGCGCCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCCGCCA 1653042 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| ||||||||||| || ||||||||| |||||| || | || ||||||| Sbjct 1653043 TCCGTCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCTGCCATGATTTACGAAGAGA 1653102 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | ||| | ||| |||||| || | || |||| ||| ||| || || |||| Sbjct 1653103 CCCGCGGTGTGCTCAAGTCCTTCCTTGAGTCTGTCATCCGTGACGCTGTCACATACACCG 1653162 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || |||||||||||||| || ||||| ||||||| || | || || || | Sbjct 1653163 AGCACGCGAAGCGTAAGACTGTCACTTCTCTGGATGTCGTCTACGCCCTCAAGCGCCAGG 1653222 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 |||||| | || ||||| || Sbjct 1653223 GCCGTACCCTCTACGGTTTCGG 1653244 Score = 165 bits (182), Expect = 1e-36 Identities = 188/250 (75%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| | | || || ||||| || ||||| |||||||| ||||| Sbjct 5035176 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATTCAGGGAATTACCAAGCCCGCTAT 5035118 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| || || |||||||| ||||||||| |||| | || |||| || |||| Sbjct 5035117 CCGTCGTCTCGCACGCCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAGGAGAC 5035058 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | |||| ||||||| || || |||| ||| ||| | ||| || || Sbjct 5035057 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTTACCTACACTGA 5034998 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| || | || | ||||| || | || || || || Sbjct 5034997 GCACGCCAAGCGCAAGACTGTCACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 5034938 Query 16672 CCGTAAGATT 16681 ||||||| || Sbjct 5034937 CCGTAAGTTT 5034928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075116798063