Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03-
24] 91 sequences; 28,360,408 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 1e-14
>seq1
Length=5488300
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || ||||| | || |||| ||||| |||||||| ||||| ||||||||||||| |
Sbjct 207379 CCACCACGTAGACGGAGAACCAAGTGCAGAGTGGACTCTTTTTGAATGTTGTAGTCGGAC 207438
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || ||||||||| || ||||| || | ||||| ||||| ||||| ||
Sbjct 207439 AGAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGGGGA 207498
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| |||||| ||||| ||| | ||| || | | | | ||||| | |||
Sbjct 207499 ATGCCCTCCTTGTCCTGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCGACC 207558
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGAC 16923
|| | ||||||||| ||||| ||||| || |||||
Sbjct 207559 TCAAGGGTGATGGTCTTTCCAGTCAGGGTCTTGAC 207593
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || || | || |||| || || ||| |||||| || ||||||||||| |
Sbjct 206923 CCACCACGCAGACGCAACACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 206982
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || ||||||||| || || || || | ||||| ||||| ||||| |||
Sbjct 206983 AGTGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGG 207042
Query 16829 ACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887
| ||||| ||||| ||| ||||| ||| || | | | | ||||| | |||
Sbjct 207043 ATACCCTCCTTGTCCTGAATCTTGCT-CTTGACGTTGTCAATGGTGTCTGAGCTCTCAAC 207101
Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | |||||||| |||||||||| || ||||||||||| |||||
Sbjct 207102 CTCGAGCGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAAATTTGCAT 207149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087550732090
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |