Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq49 132 3e-26 seq39 132 3e-26 seq36 132 3e-26 seq4 107 1e-18 seq1 89.7 3e-13 >seq49 Length=3274 Score = 132 bits (146), Expect = 3e-26 Identities = 85/93 (91%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| ||||||||||||||||||||||||||||||| || |||||||||| Sbjct 2370 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 2429 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| |||||||||||||||||||||||||||| Sbjct 2430 ATCCATTCATGCGCGTCACTAATTAGATGACGA 2462 >seq39 Length=6658 Score = 132 bits (146), Expect = 3e-26 Identities = 85/93 (91%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| ||||||||||||||||||||||||||||||| || |||||||||| Sbjct 905 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 846 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| |||||||||||||||||||||||||||| Sbjct 845 ATCCATTCATGCGCGTCACTAATTAGATGACGA 813 >seq36 Length=7256 Score = 132 bits (146), Expect = 3e-26 Identities = 85/93 (91%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| ||||||||||||||||||||||||||||||| || |||||||||| Sbjct 5842 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 5783 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| |||||||||||||||||||||||||||| Sbjct 5782 ATCCATTCATGCGCGTCACTAATTAGATGACGA 5750 >seq4 Length=2277171 Score = 107 bits (118), Expect = 1e-18 Identities = 201/293 (69%), Gaps = 12/293 (4%) Strand=Plus/Plus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258 ||||| |||||||| ||| | | || | || ||||||||||| ||||| ||||||| Sbjct 545123 TTCTATCGCTACAAGATG--GAAAAGCTCCAGGCTAAGGTCGAGGGCAAGGGCAACGGTA 545180 Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAA----GTCGCTAAGGCGCTCGGACGCCCTGCC 6314 |||| ||||| | ||||| |||||| || || || | ||| | ||||| | Sbjct 545181 TTAAGACCGTTGTCGTCAA----CCTGAACTCGGTTGCCCAGTCCCTCAGTCGCCCCCCT 545236 Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374 |||||| | || || ||||| | |||||||| || ||| | | | | | | Sbjct 545237 GCCTACCTCATCAAGTACTTCGGCTTTGAACTTGGTGCCCAGGCCAACGCTAAGCCCTCT 545296 Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434 |||| || | ||| | ||||| || || | | ||||||| ||||||| || ||| Sbjct 545297 GACGATCGTTGGATCATCAACGGTTCCCACGATGCCCCCAAGCTTCAGGACTACCTGGAC 545356 Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 ||||| || |||||||||||| || | | ||| | ||||| |||||||| Sbjct 545357 GGCTTCATCTCCAAGTTTGTGCTTTGCAAGAAGTGCAAGAACCCTGAGACCGA 545409 >seq1 Length=5488300 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | || ||||||||||| ||||| ||||||||||| || || ||||| || || Sbjct 206923 CCACCACGCAGACGCAACACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 206982 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | |||| |||| || | || || || || || || || || || || || | ||| Sbjct 206983 AGTGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGG 207042 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || |||||| ||| || ||| || || | | || ||| || ||||| Sbjct 207043 ATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACC 207102 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || || || || ||||| || || || || || ||||| Sbjct 207103 TCGAGCGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAAATTTGCAT 207149 Score = 82.4 bits (90), Expect = 5e-11 Identities = 158/231 (68%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | || | || || ||| ||||| || ||||||||||| | Sbjct 207149 TACCACCACGTAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATATTGTAATCGG 207208 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | ||| | || || | || || || || || || ||||| || ||||||| || Sbjct 207209 AAAGTGTACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATAAGGCGCTGCTGATCGGGGG 207268 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATC--TCCACTTTC 38266 | | ||| || || || |||||| ||||||||| | || ||| || | || || Sbjct 207269 GAATGCCCTCCTTATCTTGAATTTTGGACTTCACATTATCGATAGTGTCGGACGAC--TC 207326 Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| | ||| ||||| || || || | || || ||||| |||||||| Sbjct 207327 GACTTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTAACGAAAATCTGCAT 207377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946828522621