Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03-
24] 91 sequences; 28,360,408 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq49 132 3e-26
seq39 132 3e-26
seq36 132 3e-26
seq4 107 1e-18
seq1 89.7 3e-13
>seq49
Length=3274
Score = 132 bits (146), Expect = 3e-26
Identities = 85/93 (91%), Gaps = 5/93 (5%)
Strand=Plus/Plus
Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958
|||||||||| ||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 2370 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 2429
Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||| ||||||||||||||||||||||||||||
Sbjct 2430 ATCCATTCATGCGCGTCACTAATTAGATGACGA 2462
>seq39
Length=6658
Score = 132 bits (146), Expect = 3e-26
Identities = 85/93 (91%), Gaps = 5/93 (5%)
Strand=Plus/Minus
Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958
|||||||||| ||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 905 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 846
Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||| ||||||||||||||||||||||||||||
Sbjct 845 ATCCATTCATGCGCGTCACTAATTAGATGACGA 813
>seq36
Length=7256
Score = 132 bits (146), Expect = 3e-26
Identities = 85/93 (91%), Gaps = 5/93 (5%)
Strand=Plus/Minus
Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958
|||||||||| ||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 5842 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 5783
Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||| ||||||||||||||||||||||||||||
Sbjct 5782 ATCCATTCATGCGCGTCACTAATTAGATGACGA 5750
>seq4
Length=2277171
Score = 107 bits (118), Expect = 1e-18
Identities = 201/293 (69%), Gaps = 12/293 (4%)
Strand=Plus/Plus
Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258
||||| |||||||| ||| | | || | || ||||||||||| ||||| |||||||
Sbjct 545123 TTCTATCGCTACAAGATG--GAAAAGCTCCAGGCTAAGGTCGAGGGCAAGGGCAACGGTA 545180
Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAA----GTCGCTAAGGCGCTCGGACGCCCTGCC 6314
|||| ||||| | ||||| |||||| || || || | ||| | ||||| |
Sbjct 545181 TTAAGACCGTTGTCGTCAA----CCTGAACTCGGTTGCCCAGTCCCTCAGTCGCCCCCCT 545236
Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374
|||||| | || || ||||| | |||||||| || ||| | | | | | |
Sbjct 545237 GCCTACCTCATCAAGTACTTCGGCTTTGAACTTGGTGCCCAGGCCAACGCTAAGCCCTCT 545296
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
|||| || | ||| | ||||| || || | | ||||||| ||||||| || |||
Sbjct 545297 GACGATCGTTGGATCATCAACGGTTCCCACGATGCCCCCAAGCTTCAGGACTACCTGGAC 545356
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
||||| || |||||||||||| || | | ||| | ||||| ||||||||
Sbjct 545357 GGCTTCATCTCCAAGTTTGTGCTTTGCAAGAAGTGCAAGAACCCTGAGACCGA 545409
>seq1
Length=5488300
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | || ||||||||||| ||||| ||||||||||| || || ||||| || ||
Sbjct 206923 CCACCACGCAGACGCAACACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 206982
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| |||| |||| || | || || || || || || || || || || || | |||
Sbjct 206983 AGTGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGG 207042
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| || || |||||| ||| || ||| || || | | || ||| || |||||
Sbjct 207043 ATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACC 207102
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| | || || || || || ||||| || || || || || |||||
Sbjct 207103 TCGAGCGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAAATTTGCAT 207149
Score = 82.4 bits (90), Expect = 5e-11
Identities = 158/231 (68%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | ||| | || | || || ||| ||||| || ||||||||||| |
Sbjct 207149 TACCACCACGTAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATATTGTAATCGG 207208
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | ||| | || || | || || || || || || ||||| || ||||||| ||
Sbjct 207209 AAAGTGTACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATAAGGCGCTGCTGATCGGGGG 207268
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATC--TCCACTTTC 38266
| | ||| || || || |||||| ||||||||| | || ||| || | || ||
Sbjct 207269 GAATGCCCTCCTTATCTTGAATTTTGGACTTCACATTATCGATAGTGTCGGACGAC--TC 207326
Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||| | ||| ||||| || || || | || || ||||| ||||||||
Sbjct 207327 GACTTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTAACGAAAATCTGCAT 207377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946828522621
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |