Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03-
24] 91 sequences; 28,360,408 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 9e-22
>seq1
Length=5488300
Score = 118 bits (130), Expect = 9e-22
Identities = 150/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | ||||| || | |||||| ||||||| ||||||||
Sbjct 207377 ATGCAGATTTTCGTTAAGACACTCACCGGCAAGACTATCACACTCGAAGTCGAGTCGTCC 207318
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||||||||| ||||| | |||| ||| || || || || ||||| || || ||
Sbjct 207317 GACACTATCGATAATGTGAAGTCCAAAATTCAA-GATAAGGAGGGCATTCCCCCCGATCA 207259
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| |||| || || ||||| || | ||||||| || || | |||||||||
Sbjct 207258 GCAGCGCCTTATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACACTTTCCGATTACAA 207199
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
||| || || |||||||| || ||
Sbjct 207198 TATCCAGAAGGAATCCACACTCCA 207175
Score = 107 bits (118), Expect = 2e-18
Identities = 146/201 (73%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070
|| ||||| |||| || || ||||||| | || || ||||| |||||||| |||||
Sbjct 207593 GTCAAGACCCTGACTGGAAAGACCATCACCCTTGAGGTCGAGTCATCTGACACCATCGAC 207534
Query 25071 TCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTAT 25129
| ||| | || | ||| ||||| || || ||||| |||||||| ||||| ||||
Sbjct 207533 AACGTTAAGTCCAAGATTCAG-GACAAGGAGGGCATTCCCCCTGACCAGCAGCGCCTTAT 207475
Query 25130 TTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGA 25189
|| |||||||| || | || || | || ||| || ||| ||||| |||||||||||
Sbjct 207474 CTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTCTGTCCGACTACAACATTCAAAAAGA 207415
Query 25190 ATCCACGCTACATTTAGTGCT 25210
||||| || || || || ||
Sbjct 207414 GTCCACTCTGCACTTGGTTCT 207394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327519412165
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |