Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03- 24] 91 sequences; 28,360,408 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1 122 7e-23 >seq1 Length=5488300 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| ||||| || | ||||| || || |||| || ||||| || | || Sbjct 207377 ATGCAGATTTTCGTTAAGACACTCACCGGCAAGACTATCACACTCGAAGTCGAGTCGTCC 207318 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || ||||||||||| |||||||| ||||| |||||||| Sbjct 207317 GACACTATCGATAATGTGAAGTCCAAAATTCAAGATAAGGAGGGCATTCCCCCCGATCAG 207258 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || || ||||| ||| | || ||| ||| || | ||||||||||| Sbjct 207257 CAGCGCCTTATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACACTTTCCGATTACAAT 207198 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || |||||||| Sbjct 207197 ATCCAGAAGGAATCCAC 207181 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || ||||| ||||| || || |||| || || || || | | | Sbjct 207149 ATGCAAATTTTTGTCAAGACTTTGACCGGAAAGACCATCACGCTCGAGGTTGAGAGCTCA 207090 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| |||||||||||||| || || || || Sbjct 207089 GACACCATTGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAG 207030 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || || || ||| | ||||| || || | || || |||||| Sbjct 207029 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACACTTTCGGACTACAAC 206970 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || |||| | || | || ||||| |||| || || Sbjct 206969 ATCCAGAAGGAGAGCACCCTTCACCTGGTGTTGCGTCTGCGTGGTGG 206923 Score = 98.7 bits (108), Expect = 8e-16 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| ||||| || || || || || ||||| || |||||||| Sbjct 207521 AAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGCCTTATCTTCGCCGGCAAG 207462 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | ||||| || || | ||||| ||||||||||||||||| ||||| | || Sbjct 207461 CAGCTGGAGGACGGACGTACTCTGTCCGACTACAACATTCAAAAAGAGTCCACTCTGCAC 207402 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 || ||| | || | || || ||| Sbjct 207401 TTGGTTCTCCGTCTACGTGGTGGT 207378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727534495415