Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20coprophilum_20[genbank_20GCA_5F002072405.1_202017-03-
24] 91 sequences; 28,360,408 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1 122 7e-23
>seq1
Length=5488300
Score = 122 bits (134), Expect = 7e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| ||||| || | ||||| || || |||| || ||||| || | ||
Sbjct 207377 ATGCAGATTTTCGTTAAGACACTCACCGGCAAGACTATCACACTCGAAGTCGAGTCGTCC 207318
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | || ||||||||||| |||||||| ||||| ||||||||
Sbjct 207317 GACACTATCGATAATGTGAAGTCCAAAATTCAAGATAAGGAGGGCATTCCCCCCGATCAG 207258
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || ||||| || || ||||| ||| | || ||| ||| || | |||||||||||
Sbjct 207257 CAGCGCCTTATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACACTTTCCGATTACAAT 207198
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || ||||||||
Sbjct 207197 ATCCAGAAGGAATCCAC 207181
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| || ||||| ||||| || || |||| || || || || | | |
Sbjct 207149 ATGCAAATTTTTGTCAAGACTTTGACCGGAAAGACCATCACGCTCGAGGTTGAGAGCTCA 207090
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || ||||| |||||||||||||| || || || ||
Sbjct 207089 GACACCATTGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAG 207030
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| |||||||| || || || || ||| | ||||| || || | || || ||||||
Sbjct 207029 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACACTTTCGGACTACAAC 206970
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || |||| | || | || ||||| |||| || ||
Sbjct 206969 ATCCAGAAGGAGAGCACCCTTCACCTGGTGTTGCGTCTGCGTGGTGG 206923
Score = 98.7 bits (108), Expect = 8e-16
Identities = 108/144 (75%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| ||||| ||||||||||| ||||| || || || || || ||||| || ||||||||
Sbjct 207521 AAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGCCTTATCTTCGCCGGCAAG 207462
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
||| | ||||| || || | ||||| ||||||||||||||||| ||||| | ||
Sbjct 207461 CAGCTGGAGGACGGACGTACTCTGTCCGACTACAACATTCAAAAAGAGTCCACTCTGCAC 207402
Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||| | || | || || |||
Sbjct 207401 TTGGTTCTCCGTCTACGTGGTGGT 207378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727534495415
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |